Papaver somniferum (opium poppy): 113299665
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Entry
113299665 CDS
T05758
Name
(RefSeq) protein VACUOLELESS1-like
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113299665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113299665
Membrane trafficking [BR:
psom04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
113299665
Hops complex
113299665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
113299665
NCBI-ProteinID:
XP_026404523
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Position
7:223279103..223286081
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AA seq
627 aa
AA seq
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MAGVSVAAEWQLQHESYYRKPEIYSMQWQVDLSRNKIACAPFGGPIAVIRDDAKIVQLLA
ESALRKLNIYNSAGILLSSTRWDRPGGRLIGMSWTDDQTLVCVFQDGTVYRYNIHGEIQE
PNISLGSEFLEQNVVECVFWGNGMVCLTEGYQIFCISDFKNPNPCKLEDPLLEDYPLCIA
VIEPQHTMSGNVEVLLGVNDYILVVDEDGIQKVGEGIGPLQKMVLTQNGKFLASFTHDGR
LLVTSTTDYKEIFKYECESALPPEQLAWCGMHSVLLYWDEMLLVVGPFGDPVRYLYDDPI
ILIPECDGVRVLSNTSMEFLQLVPESTVSIFSIASTKPPALLYDALDLFDRRSAKADDNL
RSIRSNLPEAVEACIDAAGHEFDVSRQRTLLRAASYGQSFCSHVQRDRFQEMCKTLRVLN
AVRNYEIGVPLSIQQYKLLTAPVLIGRLINAHQHLLALRISDYIGLSPEVVIMHWACAKI
TASPAIHDAALLEMLLDKLKLCKGISYAAVASQADKSGRRKLAAMLVEHEPRSSKQVPLL
LSIGEEDTALMKATESGDADLVYLSLFHIWQKSPPLGFFGTIQARPLARDLFITYARCYK
HEFLKDFFLSTGQLQDVAAALRFAYKV
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgtttcagtagctgcggaatggcaacttcaacacgaaagctattatcgaaaa
ccagagatctattcaatgcaatggcaagtagatctttctcgtaacaaaattgcttgtgct
ccttttggtggtccaatcgctgttattcgtgatgatgctaaaattgttcaacttcttgct
gaatctgctttaagaaaattaaacatttacaattcagctggaattcttctttcatcaact
agatgggatcgtcctggtggtcgtttaattggtatgtcatggactgatgatcaaacttta
gtttgtgtttttcaggatggaactgtttataggtataatattcacggtgagattcaagag
cctaatatatcattaggaagtgaattcttagaacagaatgttgttgaatgtgtgttttgg
ggtaatggcatggtttgtttaactgaaggctatcagattttttgtatatctgatttcaaa
aaccctaatccttgtaaacttgaggatcctcttttagaagattatccactctgtattgct
gtcattgaaccacagcatacaatgtctgggaatgttgaagtgcttttaggagtgaacgat
tatattttagttgttgatgaagatggtattcagaaggttggagagggaattggaccttta
cagaaaatggtcttgactcaaaacgggaagttccttgcatcatttactcatgatggccgg
cttctggttacttccactacggattataaagagatattcaagtatgaatgtgagtcagcc
ttacctcctgagcagttagcttggtgtggaatgcatagtgtacttctctactgggatgaa
atgcttttggtggtaggtccatttggtgatccagttcgatatctatatgatgatcccatc
attcttattccggagtgtgatggagtgagggtactttcaaataccagcatggaattctta
caattagtccctgaatccaccgtgtctatctttagcatagcgagcacaaaacctccggcc
ttattgtacgatgcgttggatctttttgacaggcgaagtgccaaggcggatgataatttg
agatcaattcgctccaaccttcctgaagctgttgaagcttgtattgacgcggcgggtcat
gagtttgatgtgtcacggcaacgaactctacttagggctgccagctatggtcaatccttt
tgcagccatgttcaacgtgatcggtttcaagaaatgtgtaaaacattacgggtgctaaat
gctgtgcgcaactatgagattggtgttcctcttagtattcagcaatacaagttactaact
gcgccagttctaattggtcgtctgattaatgctcaccaacaccttttggcactgcgtata
tcagattacattggcttgagcccggaggtggttataatgcactgggcgtgtgcaaaaata
acagcttcgccggctattcatgatgctgctcttcttgaaatgttgcttgataagttgaaa
ttgtgcaaaggcatatcatatgctgcagttgcctctcaagcagataaaagtggccgtcgg
aagttagctgcaatgcttgtcgaacatgaaccacgttcctccaaacaggttcctcttttg
ttaagcataggagaggaagatacagctttgatgaaggctactgagagtggtgatgctgac
cttgtttatctttccctcttccacatctggcagaagagtccaccgctggggttttttgga
acgatacaggcaagacctctggctcgggatctattcatcacatatgcgcggtgttataaa
catgagttcctgaaagacttctttctctcaactggacagcttcaagatgtggcagccgcc
ttgaggttcgcttacaaggtgtaa
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