Papaver somniferum (opium poppy): 113301008
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Entry
113301008 CDS
T05758
Name
(RefSeq) Fanconi anemia group D2 protein homolog isoform X1
KO
K10891
fanconi anemia group D2 protein
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
113301008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psom03400
]
113301008
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
113301008
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FancD2
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
113301008
NCBI-ProteinID:
XP_026405664
LinkDB
All DBs
Position
1:131732976..131747981
Genome browser
AA seq
1505 aa
AA seq
DB search
MVFLHQINSSRKKLLSSVIPETPLKTSKFTAVNVEKAEKEKDKSKHKETEKDEGVSEEKM
ISILADAGCTLFNNPSSTPSLPTDTHKFRCHLNHLFTSTSSSSNPSILSDFLTGFSSHIR
NPNNLRRILVSAPRESLLRNLLLVPSLQLQLQLTLLEKLPEYYFEISNPNGSLEDDFARL
ILNHFRWLDFLVDPKAFCDKLMEVLSICPIHLKKEIIGSLPEIIGDQNNDSIISSLQHML
EEDAELIVPVLDSFSNLNLEGQLQEQAITVALSCIRTVDGENMPYLIRFLMLSATSVNAG
RIISQIRQHLKFIGGTDSRSARGKKLKGKSQVDNYEALVLEALRSSLRFKNILCQEIFKE
LKFVVKAQDHKVIDVWLLMLIYSNGGLLQKSVEKIIKRKISEGCFRESLFDQCIQGQGDL
VKEYFSSFLSVCEFLLACKEHRAREFGMQLYASIFDEFKDTYSRQEVLGVLVAHIGSGSS
YEVTAALETMVLLASKYSQELIPLSSYINGILDYLEGFNIDNLHKVYEVFSHLALSARCS
ADSTGSSIANELLMIIRKQVSNPDLKYKKMGIIGTLKIVSCLGDRKNAACPSSSQRTNPQ
ECLELLKMSLDSCKLLPRPLTLFYDELIALLESTSLQPAIIEWIGKHVSEFEAIYLSDLE
GGKLLSENSSFELEGNLWMNLDGDLSPICLNVLPLIASSSGFIAHSSSVPLQILPAYFRL
LSVVERVTSDGSLGGIDALLGCPLHLPCPKYFARGVWLSLTGKQKQAICLSLYYGCNWIR
ELLNAFCTQVTGDLDCLSQAAREEISAKLRKRLRNLIFLECLLNTSLKLYPVSLPELHLL
PEHHGSSYFSKPSFLGNKDSKSDNKRISESTQTISSGKRKKLKNIVTSDNSQTLRQPTIM
DVLRKAGVTISQEGPKSRSSDPSYKGTESQSEELFNNDPNSPVDICAVTMVLDTQRSKCR
PLRVDCLSILSFSEIQDSCSDPAVELPLHLYLLRDLHNKLDDASPSSKQFPPGSLRAPPA
LNRMTASELLNKMRPLFPSLRKHFDCTVFVLKEGGDETYQESWKTQSASAGNPDIPDLVI
SKAVVAGSVFSEILFCFSKMLKLPQMDMQLLLDLLEAFQPIGVPELVLSINPLPSAGSID
YMYCGAYSFLEGVMDIACSFTLPQASEVIATLESVVSSAKSFVCQLLESDKKSTNLVRVQ
RVLPILCSRLGSCAQKLLMQNWDDENLPNGSKSKGDMIQKILHIYLEYSDSTADLLEEHA
CSILPQVHSGKSKSEEAGCSFPTLCSTTFIVWYRVLYEQNLTVLNKLVKEAAVVAKCAPD
VRVEAIRRFLIKLRQSVNVLVSLVNMCKIHEKVNVHAMAVKYGAKFVDLFLKVFDFLEAN
FQGQGDIIIQLVKELQKATRTIQTLCSEAKGSRRTMITTKIPATKRSMERFLFRVKALFH
NTSSGCTFWMGNLKHKDLYGQVVSSQAYADTDDANIHKEAEDAMEATIDDDQATKSDSQE
ENESE
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atggtttttctgcatcaaatcaattcctcccgaaaaaaactcctctcctccgtaatccct
gaaacgccactgaaaacctcaaaattcaccgccgtaaatgttgagaaggcagagaaagaa
aaagataaatcgaaacataaagagaccgagaaagatgaaggtgtttccgaagagaaaatg
atatcgatactagcagatgctggatgtactctcttcaataaccctagctctactccttct
cttcctactgatacacacaagttccgttgccatctcaatcatctattcacatccacctcc
tcctcttcaaatccttcaatcctatctgattttcttactggattcagttctcacatcaga
aaccctaacaatctgagaagaatccttgtttctgctccccgtgaaagtcttcttcgtaat
ctcttactagttccttctcttcaattacaactccaacttacgcttcttgagaaacttcct
gaatactattttgaaatttctaaccctaatggatcacttgaagatgattttgctaggtta
attcttaatcacttccgttggcttgatttccttgttgatccaaaggcattttgtgataaa
ctcatggaagttctttcaatttgtccaatacatttaaagaaagagattattggatctttg
cctgagattattggtgatcagaacaatgattccataatttcttctctacaacatatgtta
gaggaggatgctgagcttattgttcccgttcttgattcattttcgaatctaaacttagaa
ggccagttacaggagcaggcgattactgtagcattgtcttgtattaggactgttgatggt
gaaaacatgccttatcttattaggtttctaatgttgtcggctacatcagtgaatgctgga
cgaattatttcacagattcgtcagcatttgaagttcataggtggaactgattctcgtagt
gctcgaggaaagaagcttaaagggaaatcacaggtggataattatgaggctttggtactt
gaagctttaagatcaagtctccggtttaaaaatatattgtgtcaggagatttttaaagaa
cttaaattcgttgtcaaagctcaggatcacaaggttattgatgtttggctacttatgctt
atatactcaaatggtggactgttacaaaagagtgtcgaaaaaattataaaaaggaaaatt
agtgaaggctgttttcgtgaaagtctatttgatcagtgcattcaggggcaaggggattta
gtaaaggaatatttctcttcatttctatctgtatgtgagttcttattggcatgcaaagaa
cacagagcaagggagtttggcatgcaattgtatgcgtctatcttcgatgagttcaaagat
acttattcaagacaggaagtcctaggtgtgttagtcgcccatataggttctggcagtagt
tatgaagtgactgctgcactggagaccatggtactgttagcttctaaatattcacaggag
ctgatcccactttcatcgtacattaatggcatcttggactacttggaagggtttaatatc
gataatctacacaaggtctatgaagtgttcagccatttggcattgtccgcacgctgtagt
gcagattccactggatcttctattgcaaatgagcttttgatgatcataaggaagcaggtt
agtaatccagatttgaaatataagaagatgggtataattgggactctgaagatagtttct
tgtcttggtgatcgaaaaaatgccgcttgtccatcatcttctcagagaacaaatcctcag
gagtgtttagaacttctgaaaatgtcattggattcgtgcaagttgttgcctcgacccttg
accctgttttatgatgaacttattgccttactggagtctacaagtctacaaccagcaatt
atagaatggattgggaaacatgtaagtgaattcgaagcaatatatttgtctgatcttgaa
ggagggaaattgctatcagaaaactcgtcttttgagttagaagggaatttgtggatgaac
ttagacggggatctgtctcccatttgtttgaatgtcttgccacttatcgcctcttcttcc
ggttttattgcccacagttcatcagtgcctttgcaaattcttcctgcatacttccgtctt
ctctctgttgttgagagggtgacaagtgacggatctcttggtggcattgatgcactactt
ggttgccctttgcaccttccttgccctaagtattttgctcggggtgtttggttgtctctg
acagggaaacaaaagcaagcaatatgcctttctctctattatggatgtaattggataagg
gaattgctcaatgccttttgtacacaagttactggagatttagattgtttaagtcaggca
gcgagggaggaaataagtgcaaagttgcgaaagcgcttgaggaacctaatttttctggaa
tgcttattgaatacctccctcaaactgtaccctgtatctctacctgagctccaccttttg
ccggagcaccatggatcttcttactttagcaagccaagttttttaggaaacaaggattca
aagagtgataacaaaagaatatctgagagcactcagaccatttcatcgggaaaaagaaaa
aagttgaagaacatagtgacttcagataatagtcaaacgctgaggcaacctacgatcatg
gatgtgctgagaaaagcaggcgttactataagccaagaagggccaaaaagcagatcgtcc
gacccttcgtacaaggggacagaatctcagtctgaagaacttttcaacaatgatcctaac
agccctgtagatatctgtgcagttaccatggttttggacacacaaagatctaaatgcagg
cctttacgagttgactgcttgtccatattgagcttttctgagattcaagattcttgttct
gatcctgcagttgagttacccttgcatttgtaccttctacgcgatcttcacaacaagctg
gatgatgcaagtccttcgagcaaacaatttccacctggaagcttaagggcaccacctgct
ctcaacaggatgacagccagtgagctcttgaacaagatgaggccactatttccaagccta
agaaaacattttgattgcacagtttttgttcttaaagaaggaggggatgaaacttatcaa
gaaagttggaaaactcagtctgcttctgctggaaacccagatatacccgatttggtgatc
tcaaaggcagtagttgctggttctgtcttcagtgagattcttttttgttttagcaagatg
ctaaagcttcctcagatggatatgcagctactcttagacctcctcgaggccttccagcca
attggggtacctgagcttgttctctccataaacccattgccttctgctggcagcatagat
tacatgtattgtggtgcttattccttcttggaaggtgtaatggatatagcctgttctttc
acacttcctcaggcatcagaagttattgctactctagaatcagtggtgagttctgcaaag
tcattcgtttgtcaattgctagaaagtgacaagaaaagtacaaatttagtgcgcgtccag
agagtccttcctattctgtgcagcagacttggaagttgtgcacagaagctgttaatgcaa
aactgggatgatgaaaatcttccgaatggttcaaagagcaagggagacatgatccagaag
atactgcacatctatttggagtatagtgattccaccgctgatttgctcgaggaacatgca
tgctctatcttgccacaggtccattctggaaaaagtaaatctgaagaagccggttgtagt
ttcccaacattgtgctcaacaacatttattgtttggtatcgggtattgtatgagcagaat
ctcacagttcttaacaagttggtaaaagaagctgctgtcgtagcaaaatgtgccccagat
gttcgagttgaagctataagacggtttttgataaaactacgccagtctgttaatgtgctt
gtttctttagtcaacatgtgcaagattcatgaaaaggtaaatgtgcacgcaatggcagtc
aagtatggtgcgaagtttgtcgatttattcctcaaagttttcgacttcctagaagccaat
tttcaagggcaaggtgacatcattatccaactggtgaaagagctccaaaaggcaacaaga
acaatacaaaccctgtgttctgaggccaagggctcaagacgaacaatgataacaactaag
attcctgctacaaagcggtccatggaacgatttttgttccgtgtcaaggcactctttcac
aatacgtcaagtggatgcacattttggatgggcaacctaaaacacaaggacttgtacggc
caggtggtaagttctcaagcttatgcagatacagatgatgctaacattcacaaagaagca
gaagatgccatggaggcaaccatcgatgatgatcaagcaaccaaaagtgatagccaagaa
gaaaatgagtctgaatga
DBGET
integrated database retrieval system
