Papaver somniferum (opium poppy): 113301605
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Entry
113301605 CDS
T05758
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113301605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113301605
Membrane trafficking [BR:
psom04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
113301605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
VPS8_N
TPR_Vps41
Clathrin
ANAPC4_WD40
WDR55
Beta-prop_EML_2
Beta-prop_EML
WD40_CDC20-Fz
WD40
zf_RING_Vps8
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
TPR_VPS8_2
Beta-prop_HPS5
WD40_Prp19
zf-RING_2
Beta-prop_LRRK2
zf-RING_Vps41
MinC_N
Motif
Other DBs
NCBI-GeneID:
113301605
NCBI-ProteinID:
XP_026406170
LinkDB
All DBs
Position
8:74795168..74807145
Genome browser
AA seq
1985 aa
AA seq
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MTKKFNKAPMALDLDSFLQLQSSGDEDDDDLNNNIIPHRTVDEILLNDSDSDDTDSSTIF
KLSDNLIDSNNFHSKQSYEEVSASSSSVSGSFETLISNTFDEISVIRSSLGNSGGSLKLD
GKNTVSNSFISRRNSGNSLLLGRDLSRPLPPLFGSVKPNPKPGAALAAATAASRLIPTPH
AAAIKSRREKSLRAEEHSSLISDLEIQSGNGVYLEGLTSSEAVGSGTNQIDGESGEDGIV
GHLSSSSSVEPVVEACFSENASGGEVSPEKSPVKKVIEGESTISEVGKIGSGLKGLNSCG
TTTEYTEARVDSSCVAESSSNSNDNSVVLDSVHVVEAHIRADIESPSDGKMDERPTFSPP
DSAENEHEEVHNMGEEVKSQPLKSTKSKDYTGHSAEDGEENLSVDGSNANNGVSELVNDS
VFGSECKTVKTSRSPLKPLELAEEIEKKHAFSGLDWEEGVAAQPMRLEGIRRGPPAVGYL
QIDLDNMITRKVSSQAFRSDHGSPHSVAVHANFIAVGMSKGLILVAPSKYSPYHADRMDP
KMLYLGPQADKSQSQVTSMCFNHQGDLLLAGYGDGHIIFWDVQKAQVVKLISGEHTSPVV
HTLFLGQDSQATRNFKVVTGDCKGRVLLHVISVVPMFYRFTIETKCLLDGQRTGTVLSTS
PLLVDVSEGALSSAFKNATASTSGIGSMMGGVVGSKAGWKLFSDSEASSLAEQGVVIFAT
HQNALVVRLTSNLEVYAQLPKPDGVREGSMPYTAWKCTLQAQDSSAENTSSEPSDRASLL
AIAWDRKVQVAKLVKKELKVYREWTLDNTAIGVAWLDDQILVVLTLKGHLCLFAKEGMEL
HRSSFSVDGSVVDNLITYQTYLTNIFGNPEKTYHNCVAVRGATIYVIGSMQLIISRLLPW
KERIQVLQMAGDWMGALEMAMRLYDGQAHGVIDLPRTVDAIREAVLPYLVELVLSYVDES
FSYISVAFNNQVGKAEQVDDAKSSSISMQSEMQEQFARVGGVAVEFCVHIKRVDILFDKI
FSKFVAVQHGGTFLELLEPYILKDMLGCLPPEIMQALVEHYSSKGWLQRVEQCVLHMDIS
SLDFNQVVRLCREHGLYGALIYLFNRGLDDYEAPLEELLLVVQSSKRENALAIGYRMLVY
LKYCFTGLSFPPGHGTISPTRLLSVRTELVSFLLEDSKATVSELAAGCKSSSGACPNLYH
LLWLDTEATLEVLRFAFLEIPKSDLDSTNPDMEDNEENSEKSNENQNLMVQHTINSLANI
LDVKISEVDGSCVDGTGSLRIWPSKEDICHLLEFISYFIIWERATVSKAVLSHVLEYLIS
ETTLSPCNVKTENSKSREKHVLAVLGAVSETDWESSYVLHLSEMAQFYQVCGFVYASRGQ
HIAALDAYMKDLEEPLHAFSFINMLLERDNESATFRSAVLSRISELVILSREGAFFLVVD
HFSRESERILSELRPHSESLFLYLKTTIEAHLSGKLDFSFLEKGYILDVACGRIGKEQMV
EAYLKKISDLPKILQHNPVSITDDLVELYLELMCKYERISVLKFLETFESYRLEQCLRLC
QEYGVIDAAAFLLERVGDVGSALLLTLSGLKDKFENLGIAVESIISDRSSSSLPEMEHLN
FVMRMEEVKSILDILHASIGLCQRNTLRLDPEESESLWFESLDWFCDPLKDSYDNKMISK
ANLVGNGEFLFGFQEDKEALVEKWRILKSHRGTHILKKVFAQFIREVVDGMIGYVHLPSI
MAKLLADNGSQEFGDYKLTVSGLLGTYGFERRILDTAKSLIEDDTFYTMSLLKKGASHGY
SPQNPLCCICNSSLTKRYSASGIRVFSCGHATHLQCEFQENEVSNRYSVGCPICIPKKKA
GRARSKSILTTGLVKNSSPKSQRTQGNTSVHHTNEFDAEPYGLHQISRFEILNSLQKAQK
SFQIENVPQLRLAPPVVYHEKVKKGMAISLGESSTPEKAAKINKNRKPRDLKKKGSSSAT
HRFFP
NT seq
5958 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaagtttaataaagctccaatggcgttagacctagattcgtttttacaatta
caaagtagcggtgatgaagacgatgatgatctcaacaacaatatcatccctcatcgaacc
gttgatgaaattcttcttaacgactctgattctgatgacaccgattcttcaacaattttc
aaattgtctgataatctaatcgattcaaacaattttcactcgaagcaatcatatgaagaa
gtttctgcttcatcatcttccgtaagtggtagttttgaaaccctaatttcaaatacattt
gatgaaatttctgttataagatcatctcttggtaattctggtggatcattaaaactagat
ggaaagaatactgtcagcaattcattcattagtaggagaaattcagggaattctttgttg
ttagggcgggatttatcacgacctttacctcctttgtttggtagtgttaaacccaaccct
aaaccgggagcagcacttgctgctgctactgcagcgtctcgtttgattcctactcctcat
gctgctgctattaagtctcgcagagagaaatctcttcgagctgaagaacatagttctttg
attagtgatttggagattcagtcaggtaatggtgtatatttagaaggattaacatcttca
gaagccgttggatctggaactaatcaaatcgatggagaatcaggagaagatgggatagtt
ggccatttgtcgtcctcctcttcagtggaaccggtagtggaagcatgtttcagtgaaaat
gcttcaggaggagaggtttcacctgagaaaagtccagttaaaaaggttatagaaggagaa
tcaacaatttctgaagtcggtaaaattgggtcaggtcttaagggtttaaattcttgtggt
actactactgaatacacagaagcaagggtggattcttcttgtgtggcagagagtagttcg
aattcgaatgataattctgtagttttagattctgttcatgttgttgaagcgcatattcgt
gctgatattgagagtccatctgatggaaaaatggatgagagacctacattttctccacct
gattctgctgaaaatgagcatgaagaggttcacaatatgggtgaggaagtaaagtcgcag
ccattgaagagtaccaagtcaaaggattatactggtcatagtgctgaagatggagaagaa
aatctttctgtagatggaagtaatgcaaacaatggtgttagtgagctcgttaatgatagt
gtatttggatcggagtgtaagacagtgaaaacatcacgctctcctttgaagcctctcgaa
ttagctgaagaaattgagaaaaagcatgccttttctggtttggattgggaagagggtgtg
gcagcacagccgatgaggcttgagggtattcggaggggcccccctgcagttgggtacttg
cagattgatctggataatatgattacacgaaaagtatcatctcaagcattcaggagcgac
cacgggtctcctcattcagtagcagttcatgcaaattttattgccgtgggaatgtcaaaa
gggcttatacttgtggcaccaagtaaatattctccttatcatgctgaccgtatggatccc
aagatgttgtatcttggtcctcaagctgacaaatctcagtcgcaagttacttcgatgtgc
ttcaatcatcaaggtgatctgcttttagcaggatatggtgatggtcatataatattttgg
gatgtgcagaaggcacaagtggtaaaacttatctctggggaacatacatcaccagtggtg
cacactctgtttctaggtcaggattctcaagctacacgcaattttaaagtcgttactggt
gactgtaaagggcgtgtccttttacatgtaatttcagtggttccaatgttttaccggttt
accattgaaacaaagtgccttcttgatggtcaaagaacagggactgtgctgtctacttcc
cctcttctagttgatgtctctgagggtgctttatcatccgccttcaaaaatgctacagct
tccacaagtggtataggtagcatgatgggtggtgtagttggatctaaggcaggttggaag
ctcttcagtgacagtgaagcatcttcattggccgaacaaggtgtggtcatatttgctacc
catcaaaatgctctggtggtaaggctcacctccaacttggaagtctatgctcaactccca
aagccggatggagtccgagaaggttccatgccttatactgcatggaaatgtacgttgcag
gcacaagattcatctgcagagaatacgtctagcgagccatcagacagagcttcactgctt
gctatagcatgggatcgcaaagtccaagttgcaaagttggttaaaaaagagctgaaagta
tacagggaatggacccttgataatacggcaataggtgtggcatggttggacgaccagata
ttggtggtcttgaccctgaaaggccatctctgtctatttgcgaaggaaggaatggagctt
catcgttcgagcttttctgtagatggttctgtagtagacaacctcattacttatcaaact
tatttaactaatatttttgggaatcctgagaagacttatcacaattgtgttgctgtaaga
ggagctactatatatgtgattgggtctatgcagcttataatttctcgtcttcttccctgg
aaggagcgtattcaggttttgcaaatggcaggtgactggatgggtgcactagaaatggca
atgagactctatgatggtcaagcacatggtgttattgatcttcctagaactgttgatgcc
atacgggaggctgtactgccatatttggtggaattggttttatcgtatgtagatgaatca
ttttcctatatttcagtggcatttaacaaccaagtaggaaaggctgaacaagttgatgat
gcaaagagtagtagtatttccatgcagtcagagatgcaagagcagtttgcaagggtcggt
ggtgttgctgtagaattttgtgtccacatcaagagagtcgatatcctttttgacaaaatt
ttctccaagtttgtggctgtacaacatggaggaacattcttggagcttttagagccatat
atattgaaagatatgctcggatgtttacctccagagattatgcaagcactggttgaacat
tacagcagcaaaggatggttgcaacgtgttgaacagtgtgttcttcacatggacatttca
tcattggatttcaatcaggtagtaaggttatgccgagaacatggactatatggagctctt
atttatctgttcaaccgaggattagatgattacgaagcacctcttgaggaacttttgctt
gttgtacagagtagcaaaagagaaaatgcacttgccattgggtacaggatgcttgtatat
ctaaaatattgcttcacaggtctttcctttcctccaggacacggcaccatatctcccacc
agattgctttcggttagaacagagcttgtatcctttcttctagaagactcaaaagctacg
gtttcagagcttgcagcaggctgcaaatcttccagtggagcttgcccaaacctgtatcat
ctcttgtggttggatactgaagcaacattggaagttctgagatttgctttcttggaaatt
cctaaatctgaccttgattcgactaatccagatatggaggataatgaagagaatagtgag
aagagcaacgaaaatcagaatttgatggtacaacatacaataaactctcttgcaaatatt
cttgatgtaaaaatctcagaagtcgatggttcgtgcgtggatggtactggttccctaaga
atatggccttcgaaagaagacatttgtcatctgcttgaatttatttcctacttcattata
tgggaaagagctacagtttcaaaggccgtattaagtcatgtattggagtacttgatttca
gaaactactttgtccccttgcaatgtgaaaaccgaaaattctaagagtagagagaagcac
gtgcttgccgttttaggagcagtttctgaaacagactgggagtcatcttatgtattgcat
ctgagcgaaatggcccaattttaccaggtttgtggctttgtatatgctagtagaggtcag
catattgctgctttggatgcctatatgaaagatctggaggagccccttcatgcgttttct
tttatcaacatgttactagaaagagataatgagtcagcaacttttcgttctgctgtcctt
tcccgaatctctgagctagttatcttaagcagggagggagcattctttttggtcgttgac
catttcagtagagaaagtgaacgtatcctatctgaactccgccctcattcagaaagcctt
tttctatatctaaagacaaccattgaagctcacctgtcggggaaacttgatttttctttt
ttggaaaagggttatattctggacgtggcatgtggaagaatagggaaagagcaaatggtg
gaggcttatttgaaaaaaatctctgatctcccaaagattctacaacataatccagtcagt
ataactgacgatttagtagaactttatctcgagcttatgtgcaagtacgaacggatatct
gttcttaagtttttggagacatttgaaagttataggctggagcagtgtttgcgtttatgt
caagagtacggggtcattgacgcagctgctttcttattagaaagagttggtgatgttgga
agtgctttgctacttactctttcggggctcaaagacaaatttgaaaatctcggaattgct
gtggaaagtataatttctgaccgttcatcaagtagcctccctgagatggagcatctaaac
tttgttatgaggatggaagaggtaaaatctatacttgatatcctgcatgcctcgatcggc
ttatgccagcgtaataccctacgcttagatcccgaggagtcagagtccctatggtttgag
tcgcttgactggttttgtgaccctttaaaagattcttatgataataaaatgatatccaaa
gcaaatcttgttggcaatggagaattcctgtttggttttcaagaggacaaggaagcattg
gtggagaaatggaggatattgaaatctcacagaggtactcatattctcaaaaaagttttt
gctcagttcatcagggaggttgttgatggaatgatcggatatgtacaccttccgtcaatc
atggctaagctcctggcggataatggcagccaggagtttggcgattataaactcaccgta
tcgggattgctgggaacctatggatttgagagacgaattctggacactgccaaatcattg
atcgaggatgatacgttttatacaatgagcttactcaagaagggagcttctcacggttat
tcaccacagaatccactttgctgtatttgcaattcctcccttaccaaaagatattcggcc
tctggtattcgagtatttagttgtggacatgcaactcatctccagtgtgaatttcaagaa
aatgaagtatcaaatcgttactcagtgggatgccctatttgtatcccgaagaagaaggct
ggacgagctagaagcaagtcaatacttacaactggattagtgaagaattcttcaccaaaa
tctcagagaacccaagggaacacttctgttcatcacactaatgaatttgacgctgaacct
tatggacttcatcagatctcacggtttgagatcttgaatagtcttcagaaagctcaaaaa
agttttcaaatagaaaatgtgccccagttgaggcttgcacctcctgtggtatatcatgag
aaggtaaagaaaggaatggctatttctcttggggaatcaagtacaccggaaaaagctgca
aaaataaataaaaacaggaagccaagggatctgaaaaagaagggttcatcatcagcaaca
catagatttttcccttaa
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integrated database retrieval system
