Papaver somniferum (opium poppy): 113301786
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Entry
113301786 CDS
T05758
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04120
Ubiquitin mediated proteolysis
psom04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113301786
04120 Ubiquitin mediated proteolysis
113301786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113301786
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113301786
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113301786
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
FlxA
zf-RING_16
zf-RING_11
zf-RING_5
zf-C3HC4_4
GTP-bdg_M
Motif
Other DBs
NCBI-GeneID:
113301786
NCBI-ProteinID:
XP_026406388
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Position
8:complement(81750531..81756594)
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AA seq
550 aa
AA seq
DB search
MMRLQTYAGVSVAGALAVIYHAFSSRGQFYPAMVYLSTSKICLVLLLNMGLVMMCILWQL
TKRLFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLA
QKRVEYIETTPAVTMLSHSRIVSFMGFLLILDSIFLYSSLQYLIQTWKASVSLFFAFEYM
ILATTTVSTFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYG
VPLHLIRELYETFRNFKVRVADYIRYRKITSNMNDRFPDATPEELNTGDATCIICREEMA
TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPMEGGTAASVGQQGGRAQVHQQAGIG
GGTSPQGSAGGAANTHLTQHQARIQAAAAAAAIYEKSYVYPSANTLAWSTGYAVLPRGAT
SSSDFSNTESTGERIISGISGGQTNVTHPQVSQGAFVPLHAFSGVNLKDGDKSGNDLNGY
GSHLEVQERLLKQQIEVLQSQLRQLNHHKSDNTNASIPSPADNKGKGIASSSSESDRIAE
EVKMKREKIQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggctgcaaacttatgctggggttagtgtggcgggtgctcttgctgtaatatat
cacgcttttagtagtagaggtcaattttatccagccatggtgtacttatcgacctcgaag
atctgtttggtgctacttctgaacatgggtttggtgatgatgtgtattttgtggcagtta
actaaacgtttgtttcttgggtcactacgggaagcagaggtggagaggttgaatgaacag
tcttggagggaagttatggagatacttttcgcgatcactatattcagacaggatttctca
gttacttttctcgctatggttacggctttactgttaattaaggcgttacattggttggct
cagaaaagggtcgagtacatagagacaactccagctgtgacaatgttgtcacactccagg
attgtttcttttatggggtttcttcttattctggatagtatctttttgtacagttcgtta
cagtatttgatccagacatggaaggcttcagtttctctcttctttgcatttgagtatatg
atactagccacaacaacagtgtcaacatttgtaaaatatgtcttttatgttagtgacatg
cttatggaagggcagtgggagagaaaggcagtctataccttctacctggaacttattcga
gatttacttcacttgtctatgtatctgtgcttctttcttgtgattttcatgaactatgga
gtgccgttacacttgatccgggaattgtacgagacattccgcaacttcaaggtccgtgtc
gctgattatattcggtacaggaaaatcacttcaaatatgaacgatcgtttcccagatgca
acgcccgaagagcttaacacaggtgacgcgacctgcattatttgtcgtgaggagatggct
acagcgaaaaaactcatctgcgggcacctttttcatgtgcattgtcttcgatcttggtta
gaacgacagcatacttgccctacatgtagagctttagttgtcccaatggaaggtggaaca
gctgcatctgtggggcaacagggagggcgagctcaagtccatcaacaagctggaattggt
ggcggtacatcaccacaaggttctgcaggtggtgcagccaacactcatttgactcagcat
caggctagaatacaagctgctgctgcagctgcagcaatatatgagaaatcctacgtttac
ccttctgcaaatacacttgcatggtctactggttatgctgtacttcctcggggtgctaca
tcttcgtcagatttttctaatactgaatctaccggagaaagaataatctctggaatttca
ggtggacagacaaatgtcacgcatcctcaggtttctcaaggtgccttcgtccctttgcat
gcatttagtggtgtcaatttgaaggacggtgacaagtcaggaaatgacctgaatggatat
ggttctcacttggaggtccaggaaagacttctcaagcagcagattgaggttctacagagc
cagctgcgtcagttaaatcatcacaaatcagataatacaaacgcaagcattccatcacca
gctgataacaagggcaaagggattgcatcatcatcttcagagagtgatcgtattgctgaa
gaggtaaaaatgaagagagaaaagattcaatga
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