Papaver somniferum (opium poppy): 113301846
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Entry
113301846 CDS
T05758
Name
(RefSeq) autophagy-related protein 18b-like isoform X1
KO
K17908
autophagy-related protein 18
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
113301846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113301846
03029 Mitochondrial biogenesis [BR:
psom03029
]
113301846
Membrane trafficking [BR:
psom04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
113301846
Mitochondrial biogenesis [BR:
psom03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
113301846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_Vps41
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
113301846
NCBI-ProteinID:
XP_026406469
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All DBs
Position
8:complement(66235956..66241346)
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AA seq
380 aa
AA seq
DB search
MTNQSSSSPSPILCASFNQDYSGFSIGTRDGFKIFDSDSGRLCYCRAMGAFNIVEMMFGS
SLLAIVGAGEQPSLSPRRLCLFNTKTGAAARELNFLTSILAVRLNMKRLIVLLQDKTYIY
DLNSLAILDTIDTVSNPKGLCAFSPNSVSCYLALPASTTKGSVLLYNVMELQSHCEIEAH
RSPLAAIALSSNGLYIATASEQGTIIRVHLVTQATKSYGFRRGTYPSAIYSLSFGPSMQL
PDILVATSSSGSVHVFSLAFMINQRSKRSSSLLGSMIPNKINDAFEPAHHYVLPNAVPAG
VKSYVMIRGRGADTVAGISPLSQPVISQALITIITFSGYFQQYKFSINHASSGSWSLERE
LNLLTAILDNVSLLAFLLDM
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatcagtcctcttcttctccttctccaattctctgtgcttctttcaaccaggat
tacagtggattttcaattggaacacgagatggattcaaaatatttgattctgatagtgga
agactttgttattgtagagctatgggagcatttaacattgtagaaatgatgttcggctca
agtctacttgccattgtaggggcaggagagcagccatcattatctccgcgacggctatgt
cttttcaatactaaaactggagctgcagctagagaactaaatttcttgacttcaatcctt
gctgttcgtttaaatatgaaaaggctcatcgtcttattgcaagataagacttacatatat
gatctgaatagtcttgctatactggataccattgatacagtgtcaaatccaaagggactt
tgtgcattctccccaaattcagtaagctgctacttagctcttcctgcgagtacgacaaaa
gggtctgtgcttctttataatgtaatggaactccagtcgcattgtgagatagaagctcat
cgctcaccattggctgcaatcgccctttcatccaacggattatacatagcaacagcttct
gagcagggaaccataatcagagtacatctggttactcaagcaactaagtcttatggtttt
cggaggggaacctatccgtcagccatatattccctctcatttgggccgtcaatgcagctt
ccagatatactggttgccacaagctcatcaggttctgtgcatgttttctctcttgcattc
atgataaaccaaagaagcaaaagatctagcagccttcttggatcaatgattccaaataaa
ataaatgatgcttttgaacctgcccatcattatgttcttcccaatgcagtcccagcagga
gtaaaaagttatgtaatgatccgaggtcgaggtgcagacacagttgcaggcatatctcct
ctatcgcagcctgtcatttcccaagctttgattactataatcaccttcagcggatacttt
caacaatacaagtttagtatcaaccatgcaagcagcggctcatggagtttggaacgcgaa
ctaaatctactaactgctattttagataatgtttccttacttgcttttttgcttgacatg
taa
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