Papaver somniferum (opium poppy): 113301857
Help
Entry
113301857 CDS
T05758
Name
(RefSeq) nuclear pore complex protein NUP160-like
KO
K14303
nuclear pore complex protein Nup160
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113301857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113301857
03036 Chromosome and associated proteins [BR:
psom03036
]
113301857
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113301857
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
113301857
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP160_helical_2
Beta-prop_Nup120_160
TPR_NUP160_120_M
HEAT_Nup120
TPR_Nup160_C
NUP160_helical
THR_N
Motif
Other DBs
NCBI-GeneID:
113301857
NCBI-ProteinID:
XP_026406484
LinkDB
All DBs
Position
8:complement(84423968..84437506)
Genome browser
AA seq
1508 aa
AA seq
DB search
MKSGSMAGLEVPVIGSDAIKWFEIQIPSSSLAITGNTATSQQQHSFAPMTEDVSSYHIIG
KPPAYLIWRIHKNQPNALELIEFSASEEFPKTGLRLIFQDALSPFAFICKNETRSNPYLL
YTLTISGIAYVIQLRNLCDYASCTIYPQNEFTEFDLKANSQPETTITSIAAVKGCLVVGR
SDGSVGCFHLGILDPSSPGFVNELRDDAGIGRLWGFMSRGRAVGPVQDMVISDVQGRSLI
FALHADKTLRAWDLLGHTRVLHHTLSIPESAGATLLRFWVGDANPVTRLISVALLYRNDM
EVDKDIIGMFILRFNPGDKINLSMEPSMQNIYLGEGALVDLKFASDKLWILKDEGLESYD
ILNNDVNLEKVHSYGMQEACVADQLLQVSEHSSDDLIWASNSLFSSVKDLVVPFVSSIFS
RRLLHPGVHQNVTFRATIQDYNKYWTDSEFQSLSLDDLKQEMFSLIESEGSAENPISIVY
CWKSFCARYFHYWCINNRPYGLLVDKATGAVGLIRKSSISLFRSLENVELLIYGAFDEFG
HLVISGLDLPNDDSDREILFDVLRCISSINQQLGRAAPAIFYESLVGLPIISSEEVVPRL
LKILETGYSSSVAAIQVSQVGADSAWLKELGDHKNQRKFSIDMLRSLHSLCNKAGTWTRV
LNVIEHYLKFLVPCKSMQKLDSEVDLNISTSILVQSTSQVAKVMFESALDILLLLGYLVN
ISGQVQMVGDDISRIEQELVPMVQEILMEWLILHFLGTMPSRSPTPEDFSSQLSALHIDS
NADKKRWNQKLGTHDFTLASLLFLNFQSSAEDNVYLCSRYLPSPNKYIKSVRNFISWIIW
GGMGGESSGFFSHSTELAKILLRHGQFEAVESLIAMIDAHSRKEKTSQGVQTTDGDWCIR
LHLLGLCLLARAQSGLQGISKEVKVREAVRCFFRASSGSGASEALQSLSFPGLPNPGHSD
CESAAAWKLHYYQWAMGIFEQYNLSEGACQFCLAALEQVDEVVDLEDCTHRGGLLDESAT
MIKGRLWANVFKFTLDMSFYNDAYCAIVSNPDEDSKNICLRRFIIVLCERGATKALCDGQ
LPFVGLAEKVEKELAWKAERSDIAAKPNAYKLLYAFEIRRHNWRKAASYMYRYSTRLRSE
LALKENQQLSMALQETLNGLSAAINALNLVHPAYAWIDPQFDGCSCTDENYPNKKARTSN
EESSLADKNIKSSCPQHCIDIEKLEKELVFTSAQYLLTLANMKLKFTGKQTISSELVDIL
VQANFYDMAFTVLLKFWKGSELKRVLERVFAAISIKCCPSGLGSTFIGNDLKAHSLILTS
SEDESYVHGAIDATPLIHQSKGSGQWEKLELYLTKYKDLHPRLPVIVAETLMRIDPQIEL
PLWLVHMFKGGRHATSWGMTGQESDAASLFRLYVDYGRFTEATNLLLEYMQAFASLRPVD
ILKRKKMSSVWFPYTMIERLWCQIEEWKSSGHNSDQCDKLQKLLHGALLNHLKLIKVDSH
DAVSSAHC
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtggatcaatggcggggctggaagttcctgtaatcggcagtgatgcaatcaag
tggtttgagattcaaattccttcttcttcacttgctattactggtaatactgctacttct
cagcagcagcactccttcgctcccatgacggaagatgtttcctcatatcacatcattgga
aaaccccctgcatatctcatctggagaatccacaagaatcaacccaatgctcttgaattg
attgaattttcagcttcagaagagtttccaaagactggtcttcgcctcatctttcaagac
gcactatccccatttgctttcatatgcaaaaacgagactcgcagtaacccatatcttctt
tacacacttacaatctctggaattgcttatgttattcaactgagaaacttatgtgattat
gcatcatgtaccatatacccacaaaatgagtttacagaattcgatttgaaagctaattca
caacctgaaacaaccataactagtatagcagcagtcaaaggttgtttagttgtagggaga
agtgatggctcagttggatgtttccatcttggcatacttgatccatcttcaccaggattt
gtgaacgagctgagagatgatgctgggattggtcgcctgtggggtttcatgtcaaggggt
agagctgttggaccagtacaagatatggtgatatcggatgtgcagggaagaagtttaatt
tttgcacttcatgctgataaaaccttacgagcgtgggatcttctaggtcatacaagagtt
cttcatcatacacttagcattcctgaatcagcaggagctacacttttgagattttgggtt
ggtgatgctaatcctgttacgcgtctgatttccgtcgcactcttatatagaaatgacatg
gaagtggacaaggacatcattggcatgtttatcctacgttttaatccaggagacaaaatc
aatttgtcaatggaaccatcaatgcagaatatatatttgggagagggagctctagtcgac
ttgaaattcgcttctgacaagctttggatactgaaagatgaggggctagaatcgtatgat
atccttaacaatgatgttaatctagagaaagtgcacagctatggtatgcaggaagcatgt
gttgccgaccagctacttcaagtttcagaacattcatcggatgatctgatttgggcaagc
aattcattattttcttctgttaaggatctggttgttccctttgtatcttctattttttca
cgtaggctgctgcatcccggggttcatcaaaatgttacttttcgtgcaactattcaagac
tacaataagtactggactgattctgagtttcagtccttatcacttgatgatctaaagcag
gaaatgttttctcttattgagagtgagggaagtgccgaaaacccaatttcaatagtttat
tgctggaaaagtttttgtgctcgctattttcattattggtgtataaataatagaccatat
ggcttgctggttgataaggcgactggtgctgttggtttaatcaggaaaagttctatatcc
ttgtttcgtagtttggagaatgttgagctgcttatctatggtgctttcgatgaatttggt
catttagttatctctggcttggatttgccaaatgatgatagtgaccgtgaaattcttttt
gatgttttaagatgcattagtagtattaaccagcaattgggaagagctgccccggctatt
ttttatgaatctcttgttggtttaccaattatctcgtctgaagaagttgtccctcgtttg
ctgaagattttggaaactggatacagttcttctgtagcagcaatccaagtatcacaagtt
ggagctgatagcgcctggttgaaggaattaggggaccacaaaaatcagagaaaattttca
attgacatgctgcggtctcttcattctttatgcaataaagctggcacatggaccagagtt
ttgaatgtcatagaacattatctaaaatttcttgtcccctgcaaaagcatgcaaaaattg
gattcagaagtggacttaaatattagtacatccattttggttcagtctacatctcaagtt
gcaaaagtaatgtttgaatctgccttggacatacttctgctgttaggctatttggtaaac
attagtggacaggtgcaaatggtaggagacgatatctcaaggatagaacaagaactggtc
ccgatggttcaagagattcttatggagtggcttatcctgcatttcctaggaactatgcct
tccagatcaccgaccccggaagatttcagttctcaactctcagcgctgcacattgatagc
aacgctgataagaaacgttggaatcagaagcttggcactcatgatttcacgttggccagt
ttgctttttttaaatttccaaagttccgctgaagacaatgtctacctctgttctagatat
cttcctagtccaaacaaatatattaaatcggtaagaaatttcatcagttggattatttgg
ggtgggatgggcggagaatcttctggcttttttagtcattcaacggaactcgcaaaaatc
ctacttaggcatgggcagtttgaagctgttgagagcctaatcgcaatgatcgatgcacac
tcacgtaaagaaaagacgtcccagggtgtccagactactgatggcgactggtgtatacgc
cttcatcttctaggattgtgtcttcttgcaagggcacaatctggattgcaaggtatctca
aaagaagtaaaagttcgtgaagctgttcgctgtttctttagggcttcttctggaagtgga
gcatcagaagccttgcagagtttgtctttcccaggcctccccaaccctggtcattctgat
tgtgagtcggcagcagcatggaagcttcattattaccagtgggcgatggggatttttgag
caatataacttgagtgaaggtgcttgccaattttgtcttgcagcactagagcaagttgat
gaagttgttgacttagaagattgcacacatagaggaggtcttctcgatgaatctgcaact
atgattaaaggaaggctatgggcaaatgtcttcaagtttacattagatatgagcttctat
aatgatgcttactgtgctattgtctctaatccggacgaggatagcaaaaacatctgcctg
aggcgtttcatcattgttctatgcgagcgtggagctactaaggcactttgtgatggtcaa
ctaccttttgtggggctagcggagaaggtcgagaaagagcttgcatggaaggcggagcgg
tcagatattgcagcaaaaccaaatgcatataagttgctttatgcttttgaaatccggaga
cataactggcgaaaagcagctagttacatgtaccgatattcaacacgcttgaggagtgaa
ttagccttgaaagagaaccagcagctttccatggcactacaagagacactcaatgggctc
tctgctgctattaatgctctgaaccttgtgcatcccgcgtacgcatggatagaccctcaa
tttgatggatgctcttgcacagatgaaaattatccaaataaaaaggctcgaaccagtaat
gaggagagctctctggctgacaagaatattaaatcttcttgtccccagcattgcatcgat
attgagaagcttgaaaaggaacttgtcttcacctcagcgcaatatttgcttacactagca
aatatgaagttgaaatttacaggaaaacaaacaatttcgtcagaattggtggatattttg
gttcaagcaaacttttatgatatggcatttacggttcttctgaagttctggaaaggttct
gaattgaagagggtattagagcgagtatttgctgctatatcgataaaatgttgtcccagt
ggattaggatccacatttattgggaatgatttgaaagcacacagtcttatactgacatca
tcagaagatgaatcatatgtccatggtgcaattgatgcaactccccttattcatcaatcg
aaggggagtggccagtgggaaaagctcgagctttaccttacgaagtataaagatttgcac
ccgaggttaccagtaattgttgctgaaacactaatgcgtatagaccctcagattgagttg
cctctttggctggttcatatgttcaagggaggtagacatgcaaccagttggggaatgact
ggtcaagaatcagatgctgcatctttattccggttatatgttgattatggtcgatttaca
gaagctacaaatttattgcttgaatacatgcaagcctttgcatctctgagaccagtggac
atactcaagcgaaaaaagatgtcttcagtttggttcccatacacaatgatcgagagactt
tggtgccaaattgaggagtggaaaagctctggtcataatagtgatcaatgtgataagctc
caaaagctattgcacggagctttattgaatcatctaaaactaataaaggtggattcacac
gatgcagtatcttccgcacactgttaa
DBGET
integrated database retrieval system
