Papaver somniferum (opium poppy): 113302024
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Entry
113302024 CDS
T05758
Name
(RefSeq) cell differentiation protein rcd1-like isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113302024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113302024
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113302024
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
INTS7_N
Motif
Other DBs
NCBI-GeneID:
113302024
NCBI-ProteinID:
XP_026406640
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Position
8:complement(62848799..62852241)
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AA seq
297 aa
AA seq
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MIRPMAIPRVILELQDESSRETALRCLSRFLIEIREENPRMYNDAGHMLYYSFGTMSILL
QEILAFLRKMVEGSLKYRSIKRIANVLTLIQANRLFSIAANSATREKLIDSQVPIFLLPV
IKFKGPLEDFDNICAVALSVIGIMCQAREPKIIKWAVDNQISEACWSCTDTGNELTRVIG
MHILEAILRNEYGMSYICSPMCDDLLTGLMKAWREMITILAKSQDYSPRLVFHVLRCYML
LCVHDRGFSAVLSYLLDPMLDGTFIESAEKFPIIGRLLDELLMTIGGNVQQLQTHAF
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgataaggccaatggctatacctcgagtaatcttggaacttcaagacgaaagttctaga
gaaactgctcttagatgtcttagtagattccttattgagataagagaagaaaatccaagg
atgtataatgatgctggacacatgctgtactattcttttggcacaatgtccatcttattg
caggaaattttagcttttctaagaaagatggtcgagggaagccttaaatacagatctatc
aaacgtatcgcaaacgttctcaccctaattcaggccaatagattatttagcattgctgct
aactcagctacgagggagaaactcatcgattctcaagttcccatcttcttattacccgtg
ataaagtttaaaggcccattagaggattttgacaatatctgtgctgtcgctctctctgtc
attgggatcatgtgccaggctagagaacctaagatcattaaatgggccgttgataaccaa
atttcggaggcatgctggagctgcacagatactgggaacgagctcactagagtgattgga
atgcatatattggaagctattctgcgaaatgaatatggtatgtcttacatttgtagtcca
atgtgcgatgatcttcttactggattgatgaaagcatggagggagatgatcacaattcta
gcaaaaagccaagactactctcctcgccttgtctttcatgttctccgttgctatatgctt
ctatgcgttcatgataggggctttagtgcagtgctgagttatcttcttgatcccatgttg
gatggaactttcattgaatctgcagagaaatttccaataattggacggttacttgacgag
cttctcatgaccattggggggaatgttcaacagctacaaacacatgcgttctaa
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