Papaver somniferum (opium poppy): 113302520
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Entry
113302520 CDS
T05758
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113302520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113302520
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113302520
mRNA degradation factors
5'-3' decay
Decapping complex
113302520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
113302520
NCBI-ProteinID:
XP_026407223
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Position
8:108052532..108056554
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AA seq
360 aa
AA seq
DB search
MTQGGKLLPNLDQQSTKLLNLTVLQRIDPYVEEILITAAHVTFYKFNVELSQWSRKDVEG
SLFVVKRNAQPRFQFVVMNRRSTENLVEDLLGEFEYEVQVPYLLYRNSAQEVNGIWFYNS
RECEDVANLFGRILDAYSKVPQKPKVSSTKSEFEELEAVPTMAVMEGPLEPSSTAGTTVT
NVPDDSPFVNFFNVAPNLGNASSAAAHGRPDQSLPSSRSSSNEPINAPSPPPAQQLPSPV
LPASSAPLLPILDSSSRNNSNNSRLTNLVKPITYFTPPPYSSPLMIPTTSSCIPTAPSLP
PPPLHPLVGPQRPPSLTPASAPTYRPEFTREKVRNALLRVIQKDQFIDMFYQELLNTRIT
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgactcagggtgggaaattgctcccaaatctagatcaacaaagcaccaaacttctcaat
ctcacagttcttcaacgaatcgatccatatgttgaagagatcttaatcactgcagctcac
gttactttctacaaatttaatgtcgaacttagtcagtggagtcgaaaggatgttgaagga
tctctctttgttgtcaagaggaacgcccagcctcgcttccagttcgttgtgatgaacagg
cgtagtacagaaaatttggtagaggatttacttggagagtttgagtatgaggttcaggtt
ccatacctcttgtaccggaattcagcgcaagaagtaaatggtatttggttttacaattca
cgggagtgtgaagacgttgcaaatttgtttggcaggatacttgatgcatactctaaggtt
cctcaaaagccaaaagtttcttcaactaaaagtgaatttgaggaactggaagcagtccca
accatggcagtgatggaaggcccattggagccatcgtctacagctggcactaccgtcaca
aatgttcctgatgattctcccttcgttaacttcttcaatgtggctccgaatttagggaat
gcttcaagcgcagcagctcatggacgacctgaccaatctctgccatcttctcgttcttct
tccaatgaaccaattaatgcaccctctcccccaccagcccagcaattaccatctcctgtt
ttaccagcttcttctgctcctcttttacctattcttgattctagtagcagaaacaacagc
aacaacagccgtctcacgaatctagtaaaacccattacatatttcacacctcctccatac
tcgtcgccattgatgataccgacaacatcttcgtgtatacctactgctccttctcttcca
cctcctcctcttcatccgctggtgggtcctcaacgaccaccttcgctcactcctgcttct
gctccaacatataggccagaatttacccgagaaaaagttcgcaatgcacttctgagggtt
attcagaaggaccagttcattgatatgttctaccaagaacttctgaatacgcgtattaca
tga
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