Papaver somniferum (opium poppy): 113302524
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Entry
113302524 CDS
T05758
Name
(RefSeq) RGG repeats nuclear RNA binding protein A-like
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113302524
Spliceosome [BR:
psom03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113302524
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
AAA_23
Motif
Other DBs
NCBI-GeneID:
113302524
NCBI-ProteinID:
XP_026407225
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All DBs
Position
8:complement(108171833..108175182)
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AA seq
388 aa
AA seq
DB search
MASSNPFDLLGDEDNEDLSQLMAKAALAAAANTAPPPQQQVKQHAKLPSKPLPPAQAVNE
ARNEGRGGGRGGGRGFGRGRGGNNREPRERREPREGGYNREPHEGGYNREPRDSGNSENT
FSSNGAVGGYGGGDRDVDRLERRGGYGGSRGSSRGGRRGGFDGGEGGDGPRRVFERRSGT
GRGNEFKREGAGRGNWGTSTDEIAQETEEVVNGNEKSADIEKLSGEEEATVDANKETPEV
EAEPKEPEDKEMTLEEYQKVLEEKRKVLQALKAEERKVEMDKDLKKMQPLACKKTNDEIF
AKLGVDKEKRKEIADKEERAKKSVSISEFLKPADGGGRNYNSSGGRGRGRGRSSRGGGSG
FDRGNNSASAVAAPLIGDPGQFPTLGGK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggcaagttcaaacccatttgatttgttgggtgacgaagataatgaagatttgtctcaa
ttgatggctaaagctgctttagctgctgcggctaatactgcacctcctcctcaacagcag
gttaagcaacatgctaagttgccttccaagccacttcctcctgctcaggctgtgaatgaa
gctaggaatgaagggcgaggaggaggccgtggtggtggccgtggatttggtcgtgggcgt
ggtggaaacaaccgtgagccacgtgaacgtcgcgagccacgtgaaggtggatacaaccgg
gagccacatgagggaggatacaaccgcgagccacgtgactctggcaatagcgagaatact
tttagcagcaatggagccgtcggaggatatggtggtggtgatagggatgttgacaggttg
gaaagacgtgggggttatggtggttcacgtggttcgtcccgcggtggccgtagaggtggt
tttgatggtggagaaggtggtgatggtcctcgtagggtgtttgaacgacgaagtggaact
gggcgcgggaatgaatttaagcgtgaaggggctggtagaggaaattggggaaccagtact
gatgaaattgctcaggagacggaggaagttgttaatggaaatgagaagagcgctgacatc
gagaaactttctggcgaggaagaagctactgtcgatgcgaacaaggagactcctgaggtc
gaggcagaacccaaagaacctgaagataaggaaatgacccttgaggagtaccagaaagtt
ctggaagagaagaggaaggttctgcaggcactgaaggccgaagaaaggaaggttgaaatg
gacaaagacttgaaaaagatgcaacctcttgcatgcaagaagaccaatgatgaaatcttc
gcaaaactgggcgttgacaaggaaaagcgaaaagagattgccgacaaggaagagagagcc
aaaaagtcggtcagtattagtgagttcctcaaacctgctgatggcggcggaagaaactac
aacagctctggtggacgtggccggggacgtggccgtagttcaagaggtggtggtagcggt
tttgaccgaggcaacaactcagcaagtgcagtggctgctcctttaattggagatcctggg
cagttcccaactctaggtggcaagtga
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