Papaver somniferum (opium poppy): 113302526
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Entry
113302526 CDS
T05758
Name
(RefSeq) glycine--tRNA ligase, chloroplastic/mitochondrial 2-like isoform X1
KO
K14164
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
113302526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psom03016
]
113302526
Enzymes [BR:
psom01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
113302526
Transfer RNA biogenesis [BR:
psom03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
113302526
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
tRNA-synt_2e
DALR_1
SoPB_HTH
Motif
Other DBs
NCBI-GeneID:
113302526
NCBI-ProteinID:
XP_026407228
LinkDB
All DBs
Position
8:complement(108288028..108303939)
Genome browser
AA seq
1071 aa
AA seq
DB search
MAILAFPLALTFLKPQTTHFLILLASKGNPNHFNNSYFHTSRRGLRKTSVSALTTSSVSQ
SSSKDTKSLTGPSIPTFQQAIQRLQEYWASVGCTIMQCSNTEVGAGTMNPLTFLRVLGPE
PWNVAYAEPSVRPDDSRYGENPNRLQRHTQFQVILKPDPGNSQDLYINSLLALGIDVNAH
DIRFVEDNWESPVLGAWGLGWEVWMDGMEITQFTYFQQAGSLQLSPVSVEITYGLERIIM
LLQGVDHFKKIKYADGITYGELFSENEKEMSAYYLEHASVNQIQKHFEFFEAEARSLLSL
NLAIPAYDQLLKTSHAFNILDARGFVGVTERARYFGRMRSLARQCAQLWVKTRESLEHPL
GIVSEANNFICSKDVIELAKAKVSDDPRVFVLEIGTEEMPPHDVVDASQQLKDLIIQLLE
KQRLSHGEVFACGTPRRLVVLVGDLCSKQVANEVEVRGPPVAKAYDQQGNPTKAAEGFCR
KNGVTMDSLFKKTDGKTEYVYVRVLESARLALEVLAEDLPSAIAKISFPKSMRWSTQIMF
SRPIRWILALHGDAAVPFTFAGVLSGSLSYGLRNTPSATIEVEKAEAYVSAMKNAGVVVE
IEERKRNILEHSISLAKSVGGHLIMQTSLVEEVVNLVEAPVPILGKFNKSFLELPKELLI
MVMQKHQKYFPVTDIHGRLLPYFIAVANGAINESVVRNGNEAVLRARYEDAKFFYEMDTN
KKFNEFRNQLKGILFHEKLGTMLDKMMRVEKTVAKLSFAMGIDKDRIPVVQEAASLAMSD
LATAVVTEFTSLSGTMARHYALRDGYSEEIAEALFEMTLPRFTGDILPKSDIGVVLATAD
RLDGLVGLFGVGCQPSASSDPFGLRRISYGLVQILVENDKNLDLKNALRLAAEVQPIPVD
GSTIDEVHQFVTRRLEQFLVDKGISPEVVRSVLLERANWPCLATKSAVKMDSLSKGELLS
KVVEAYSRPTRIIRGKDVGADLEVNEDAFETNEERELWSAFLDVKTRVHPGVEVDVFVDS
SSRLIQPLENFFNHVFVMAEDERVRKNRLALLKNVADLPKGIVDLSVMPGF
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggcgattctcgcctttcctctggccctaactttcttaaaaccacaaacaactcatttc
ttaatcctcctcgcttcaaaaggaaaccctaaccatttcaacaactcctattttcatacc
tctcgtcgtggattgcgtaaaactagtgtttctgctcttactacttcttcagtatcacaa
tcttcttctaaagacacaaaatccctaacaggaccttctattcctactttccaacaagct
attcaacggttacaggagtattgggcttccgttggatgcaccataatgcaatgtagcaat
acagaggtcggagcagggactatgaatcccttgactttcttgagagttttgggtccagaa
ccgtggaatgttgcgtatgcagagccgagtgttaggccagatgatagtcgttatggagag
aatccaaatagactccaaagacacactcaattccaggttatattaaagccagacccggga
aattcacaagatttgtatatcaacagccttcttgctttaggtattgatgtcaatgcacat
gatatacgctttgtggaagacaactgggaaagtccggttcttggtgcatggggtctgggt
tgggaggtttggatggatggaatggagatcacacaattcacctacttccagcaggctgga
agtcttcagttatcgccggtatcagtggagataacgtatggccttgaacgtattataatg
ttactccagggggtggatcatttcaagaaaatcaaatacgctgatggcattacatatgga
gagctcttttccgaaaacgaaaaagaaatgagtgcatattatttagaacatgctagtgtt
aatcaaatccagaaacacttcgaattttttgaggcagaagctcgctccttactatcactt
aatcttgcgataccagcgtatgatcagcttctgaagacatctcatgccttcaatattttg
gatgctagaggctttgttggtgttactgagcgagctcgatattttggtcgcatgcgaagt
ttagcccgtcaatgtgcacagctttgggtgaagacaagagagtctcttgagcatccccta
ggcattgtttcggaggccaacaattttatttgttccaaagatgttattgaactagctaaa
gcaaaggtgtctgacgatcctcgagtatttgttcttgaaattggaactgaagagatgcca
ccacacgatgtggttgatgcaagccagcagctcaaagatctaatcatccagttgctcgaa
aagcaaagattgagccatggagaagtgtttgcatgcggtacacctcgcagactagttgtt
cttgttggggatctgtgttctaagcaggtagctaatgaggttgaagttcgaggacctcca
gtagcaaaggcatatgatcaacaaggaaatcccaccaaggctgctgaaggtttttgccgt
aaaaatggcgtgacaatggactcactatttaagaagactgacggcaagacagaatatgtt
tatgttcgtgtgttggagtcggcacgactagctttagaggttcttgctgaagatttgcct
tctgctatcgctaaaatatcatttccaaagtcaatgcggtggagcactcagattatgttc
agtaggcccatacgttggattttggctctccatggagatgctgctgtcccatttactttt
gctggtgtgttgagcgggagcctatcttacggtcttcgtaatactccttccgcaactatt
gaggttgaaaaagctgaggcttatgttagtgcaatgaagaatgcaggggttgtggttgag
attgaggagcgcaagagaaatatcttagaacactctatttctttagcgaaaagtgttggt
gggcatcttatcatgcaaaccagcttagtagaagaggttgtgaatcttgtcgaggcacct
gttccaatacttggaaaattcaacaaatctttcctagagcttcctaaagagctgttaata
atggttatgcagaaacaccagaagtattttccagtgacagatatccatgggagattactg
ccatatttcattgctgtggcaaatggagcaatcaacgagagtgttgtaagaaatgggaat
gaagctgtactaagagctcgctatgaggatgccaaatttttctatgagatggatacaaat
aaaaagtttaatgagttccgtaatcagctgaaagggattctttttcatgagaagctgggg
acaatgctggacaagatgatgcgcgtcgaaaaaactgttgctaaattaagctttgccatg
ggaatagataaagacagaatccctgttgttcaggaagctgcatcactagctatgtcagat
cttgcaactgcagttgttacagagtttacttctctctctgggacaatggcacgccattac
gcgttaagagatggttactcagaagagattgcagaggcattatttgagatgacactgcct
agattcactggagatatacttccaaaaagtgatataggcgtagtcttggccactgctgac
agattagatggtcttgtaggtttgtttggagtcggttgtcagcctagtgcttctagtgac
ccttttggcttgcggagaatctcatatggtctggtacaaatcttggtggaaaatgacaag
aacttggacttaaaaaatgcgttaagacttgctgctgaagttcagccaataccagtagat
ggcagcacgatcgatgaagtgcaccagttcgtgacacggagacttgagcaatttttggtg
gataaaggtataagtcccgaagttgttagatctgtccttctagagcgtgcaaattggcca
tgccttgctacgaagtcggcagttaagatggatagcttgtcgaaaggcgagctactaagt
aaagttgttgaagcatattctcgtcccactagaatcatccgcggaaaagacgtgggcgct
gatttggaggtaaatgaggatgcattcgagacaaatgaagagagagaattatggagtgct
ttcttggatgtaaaaaccagagttcaccctggtgttgaggttgatgtttttgtcgattca
tcttcacgactgattcagcccctcgaaaatttcttcaaccatgtctttgtcatggcggaa
gatgaaagagttagaaaaaacaggcttgcattacttaagaatgtcgcggatctgcccaaa
gggatagtagacctctcagttatgccaggcttttag
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