Papaver somniferum (opium poppy): 113302564
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Entry
113302564 CDS
T05758
Name
(RefSeq) protein SHORTAGE IN CHIASMATA 1-like isoform X1
KO
K28108
shortage in chiasmata 1
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psom03036
]
113302564
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Meiosis-specific proteins
Others
113302564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sipho_Gp37
Motif
Other DBs
NCBI-GeneID:
113302564
NCBI-ProteinID:
XP_026407276
LinkDB
All DBs
Position
8:109658557..109665592
Genome browser
AA seq
1308 aa
AA seq
DB search
MRTRFLNIDYFSHSSEKTLKDTINFLPLPVPQISNTFVDTKSQAEAENFCFDSVVDIDFE
IETFQIDKPLSFFLNEVLPHRIDVPDRDFLSSNSDSYFDRTNFDEEDQTNSQSQTDLNQF
QQRGNEVSGEEKDKGNFKIIPFETPERDFFLEDPVGVFEHGDDLVLPDRVSETEMTLDLR
AAIPYPCTLSESIYLVEDITLDFQIDEKKSYVVEDACLIQDRNYPSTRNYPVWEVNEFEL
EVHPSPSMDDEFHFLLQSIGFQQWTESDKQLAQGDDLMRYIETANLEFLLKPHPLEQAIE
PQPAVLDMFLEMDFICRYKSSDIQENLMVTLEVSDVEYFQVITPVHFQEYQILDLNCNQL
MEVFFSSQTANQPDTCDSMFSENNPYKQLYESIISHELALVDDSFKSFPIPVLSDDKKRL
SPYTTMQEILADLKPHSPSASDGIYLDWHLLLQDRWNSDWNVMEDIDTYSVSSTLDSTDA
GFVIFDFVFSEETPDGSLTFQDSEKLKEPFGGFGSTILVEDAGQKPVMSKPGTSEKFPTL
SDSMSNFNDLSFFLNPRKSIVKQNTEPAVQDTTSYIYDMQKRSKQEEGNIRLMPFQNVDD
NVQKFEGHVDTVPLKEDSIPVNSYEPASSKANSSFTLPLKEDSIPVISYEPASSKANSSF
TLPTSDIPESKKKMPSFSDFIVIVNTQNFDKEMLISRRSSYQKILVMEKRGVQVIEREID
YPVDLILSAAMCLVWYDCKSIGNKAINTTEALSFVPLYVENIATNVLTSLSFAFSDCALV
FEGDNRYLTAIMESSDGLYAAAASLGIGLQLFCSYSPELTDEIVMGCIDYNMRLNKGQYP
KMPDTETLAESFLTRFPSIHPLSAHAILSSGGILVEFLECSSDHRIQAIEKCHVPNQSVS
LFSSLCSFGEHEGSKSGTTDCSSVSPASESNSRLRTETQRKRQKCVSDPQTLDILMDGNF
LLEPLIQSDDMNLKPPRVPKPFQSLISSKHQKADESVMSGYQPADTIFGQKQSLNAFSTN
NSEWNQIFTSSMNTDLKGEVIDLTESPTVGEDFFSSADTLNFPKVPSRGNDHAIGNSSVA
RRLSFGLNDFPSSADMNSESDMWASVKNHKRRLEDIDSIVDPLSFNTGRGPFQEQNLSTS
SSNANGLFKENNSRYYGSKPFCNAIKSSRHQQGSPWTKEFLSKIKEKSRIHQKSLQCQTI
LHDHEYPGSREKIAKRKSPSILDFYKYDGGSKPKKTTNQKWQKRLIHQPANVSKNEKASP
PGLRSWTPIDKRAKQTLSFTKNGNETQSKLVWGDGDDQLLRKRYRKET
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactcgatttctcaacatcgattacttctctcactcttcagagaaaaccctaaaa
gatactatcaatttccttccgttaccagttcctcaaatctctaatacctttgttgataca
aaatcacaagcagaagcagaaaatttctgtttcgattctgttgtagatatcgattttgaa
attgaaacatttcaaatcgataaacctctttcattcttcttaaatgaagttcttcctcac
cgtattgatgttccagatagagattttcttagtagtaactcagattcttacttcgacaga
acaaattttgacgaagaagaccaaacaaattcccaatctcaaactgatctaaatcaattt
cagcagagaggaaatgaggtctctggtgaagaaaaggataaaggaaactttaaaattatt
ccgtttgagactccggagcgggatttcttcttggaagatcctgttggtgttttcgaacat
ggggatgatttagttctccctgatcgtgtctcagagacggaaatgactctggaccttcgc
gccgcaattccgtacccttgcacactgtcagagtccatctatttggtcgaagacataacc
ctagacttccaaatagatgagaaaaagtcttatgttgttgaagatgcttgtcttattcag
gacagaaattatccctctactagaaattatccggtttgggaagtgaatgagtttgaattg
gaagttcacccaagtccatccatggacgatgaatttcattttctgctacaaagcattgga
ttccaacagtggaccgagagcgataaacaacttgctcagggagacgaccttatgagatat
attgaaactgcaaatctggagtttttattaaaacctcatcctctggagcaagctatagaa
cctcagccagcagttcttgacatgttcttagaaatggactttatatgccgatacaaaagc
tcagatattcaagagaatctaatggtaactctggaagtatcggatgttgaatatttccaa
gtaataaccccagttcattttcaggagtatcaaatccttgatttgaactgtaatcagttg
atggaagtctttttcagctcacaaacagcaaaccaaccagatacttgtgacagcatgttt
agcgaaaataatccctataaacagctttacgaatcaattattagtcatgagcttgctctg
gtggatgattcattcaaatccttccctatacctgttctctctgatgacaaaaagagactc
tcaccctacactactatgcaagaaattttagctgacttgaagccacacagcccatctgct
tctgacgggatctatttagattggcatcttttgctgcaagatagatggaacagtgattgg
aatgtaatggaggatatagatacttacagcgtcagttccacactcgactcaacagatgct
ggatttgtgatatttgactttgttttcagtgaagaaactccagatgggtcgttaactttt
caagactctgagaaactcaaggagccttttggtggctttggttctactattttggtggaa
gatgcaggtcaaaagcctgtgatgagtaaacctgggaccagtgagaagtttccaaccctg
tctgattccatgtcaaatttcaatgatctcagttttttcttgaatcctcggaaatccatt
gttaagcagaacactgagcctgctgtacaagacacaacttcatatatatatgatatgcag
aaaagaagtaaacaggaggaagggaacattcgattaatgccatttcaaaatgtggatgac
aatgtgcagaagtttgaaggtcatgtggatactgtgccattgaaggaggacagcattcct
gtaaattcttatgagcctgcgagtagtaaagctaatagcagcttcacgctgccattgaag
gaggacagcattcctgtaatttcttatgagcctgcgagtagtaaagctaatagcagcttc
acgctgccaacttctgacattccagaatcaaagaaaaagatgccttcattttctgacttt
attgttatagtgaacactcagaactttgataaagaaatgctcatatcaaggagaagttca
taccagaagatccttgtaatggagaagagaggagtccaagttattgagcgcgagattgat
tatcccgtggatcttattctcagtgctgcaatgtgcttagtatggtatgactgcaaaagc
attggaaacaaagcaataaacacaactgaagctttgtcatttgtgcctctatatgttgaa
aacattgcaacaaatgttttgacatccctgagttttgctttcagcgactgtgctctggtc
tttgagggagacaataggtaccttacagccataatggaatcatcagatggactttatgct
gctgcagctagtctgggaataggtttacagctattctgctcatattcacctgagctaact
gatgaaatagtcatgggctgcatagattataacatgaggttaaataaaggtcaatatcca
aaaatgcctgatacagaaaccctggcagaatcatttcttaccaggtttccttctattcat
cctctctcagctcatgcgatactgtcttctgggggcattcttgttgagtttcttgaatgc
tcatctgaccacagaattcaggcgattgagaagtgtcacgttccaaaccaaagtgtttct
ctgttcagttctttatgtagttttggagagcatgaaggatctaaatcaggtactacagat
tgctcttcagtgtctcctgcttcggaatcaaacagtagattgagaactgagacacagagg
aagaggcaaaaatgcgtttcagatccccaaacactcgacatactaatggatggaaacttt
cttcttgagccattaatccaatccgatgacatgaacctgaaacctcctcgggttccgaaa
ccatttcagtcattgatatcatccaaacaccagaaagcggatgaaagtgtcatgtcaggg
tatcaaccagctgatacaatatttggccagaaacagagtttgaatgctttttcaacgaac
aactccgagtggaatcagatttttacatcttctatgaacacggacttaaaaggtgaagtc
atcgacctcacagaaagtcctacggtgggtgaagatttcttctcttctgcagacactcta
aattttccgaaggttccatcaagaggaaatgatcatgcaattggaaattcaagtgttgca
agaagattatcatttggtttaaatgatttcccaagctctgcggatatgaattctgagtca
gatatgtgggcttctgtgaagaatcacaaaagaagattggaggatatagattccatcgtg
gatccattatcatttaacacaggaagaggaccttttcaggagcaaaacttatctacgtca
agtagcaacgctaacggattattcaaagagaataactcaagatattatggctccaaaccg
ttttgtaatgcgattaagtcatcgcggcatcaacaaggatcaccttggacaaaagaattt
ctaagcaaaataaaggagaagagcaggatacaccagaagtctctacagtgccaaactatt
ttgcatgatcatgaatatcctggtagcagggagaaaattgccaagagaaaaagtccatct
attttggacttctataagtatgatggaggcagcaaaccgaagaaaactaccaaccaaaag
tggcagaaacgattaattcaccaacctgcaaatgtgtcgaagaacgaaaaagcttcacct
cctggattacgatcatggactcccatcgacaaaagagcgaaacagactctatcttttaca
aagaatggaaatgaaactcaaagtaaactggtttggggtgatggagacgaccaacttcta
agaaaacgataccgaaaagaaacataa
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