Papaver somniferum (opium poppy): 113302779
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Entry
113302779 CDS
T05758
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03020
RNA polymerase
psom03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113302779
09124 Replication and repair
03420 Nucleotide excision repair
113302779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113302779
03400 DNA repair and recombination proteins [BR:
psom03400
]
113302779
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
113302779
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
113302779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Enterotoxin_b
PSI_integrin
Motif
Other DBs
NCBI-GeneID:
113302779
NCBI-ProteinID:
XP_026407516
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All DBs
Position
8:complement(119276524..119279110)
Genome browser
AA seq
323 aa
AA seq
DB search
MESGISYQRFPKIKIRSMRDDYMKFELRDTDPSMANALRRIMISEVPTIAIDLVEIEVNS
TVLNDEFIAHRLGLIPLVSDRAMEMRFSRDCDACDGDGQCAYCSVEFQLSVRCDEDQTVD
VTSADLISSDLMDVPVDVALAAARSEGFDSAENKGIIIVKLRRGQELRLRAIARKGIGKD
HAKWSPAATVTYMYEPDIHINEDMMESLTLEEKQDWVESSPTKVFDIDSNTQQVKVYDAE
AYTYDDEVIKKAEAMGKPGLVEITAREDSFIFTVESTGAVKASQIVINAIEVLKQKLDAV
RLSEDTVEADDQFGELGAHMRGG
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggagtctggaatctcataccaaagatttccaaaaatcaaaatccgaagcatgagagat
gactacatgaaatttgagctacgcgacaccgatccaagcatggcgaacgctctccgccgt
atcatgatctccgaagtcccaacaatagcaatcgacctagttgaaatcgaagttaactca
actgttttgaacgatgagtttatagctcatcgactgggtcttattccactcgtcagcgac
cgtgccatggagatgagattctctcgtgattgtgatgcatgtgatggtgatggtcaatgt
gcgtattgttctgttgagtttcagttatctgtgaggtgtgatgaagatcagactgtagat
gttaccagtgctgatttgattagttctgatcttatggacgtccctgttgatgttgcgctc
gccgctgcaaggtcggaggggtttgattcggctgagaataagggaattataattgtgaag
ctgcgacgagggcaagagttgagattgagagccatagctcgaaaagggattgggaaagac
catgctaaatggtcacctgctgctactgtcacttacatgtatgaaccagatattcatatc
aatgaggatatgatggagagcttaactcttgaagagaagcaagactgggttgaaagtagc
cctactaaagtttttgatatcgattctaatacccaacaggtcaaagtgtatgacgctgaa
gcgtacacatatgatgatgaggtgatcaaaaaggcagaagctatgggaaagcccgggctt
gtggaaattacagcgagagaagatagctttatttttacggttgaatctacaggtgctgtg
aaagcttctcaaattgtaatcaatgcaattgaggtccttaagcagaagctcgacgctgtt
cgtctctctgaagacaccgtagaagctgatgatcaattcggggaactgggagcacacatg
cggggagggtga
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