Papaver somniferum (opium poppy): 113303065
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Entry
113303065 CDS
T05758
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113303065
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psom01009
]
113303065
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113303065
03036 Chromosome and associated proteins [BR:
psom03036
]
113303065
Protein phosphatases and associated proteins [BR:
psom01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
113303065
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
113303065
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
113303065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
Htt_N-HEAT_1
Vac14_Fab1_bd
HEAT_EF3_N
PDS5
HEAT_EZ
TOR1L1_N
RTP1_C1
SCD
Cnd1
TAF6_C
CLASP_N
Adaptin_N
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
113303065
NCBI-ProteinID:
XP_026407836
LinkDB
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Position
8:130896429..130901802
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AA seq
587 aa
AA seq
DB search
MAMVDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEDRTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEYAHVLLPPLETLCTVEETCVRDKAVESLCRIGAQMKES
DLVDWFTPLVKRLAGGEWFTARVSSCGLFPIAYPSAPEMLKTELRSIYSQLCQDDMPMVR
RSAASNLGKFAATVEQTHLKSDIMSIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTKTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPQLAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLEDKVYSIRDAAANNLKRLAEEFGPDWAMQHIIPQV
LEMIKNPHYLYRMTIIHAISLLAPVMGSEITCSKLLPLIVDASKDRVPNIKFNVAKVLQS
LIPIVDQSVVEQTIRPCLVELSEDPDVDVRFFASQALQSSDQVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatggtggatgaaccactgtatccaattgcagttttgatagatgagttaaaaaat
gaagacattcaactacgtttgaactccatccgtagactttctacaatagcaagagctctc
ggtgaagatagaacaagaaaggaattaattccatttcttagtgaaaacaatgatgatgat
gatgaagtacttcttgcaatggctgaagaattaggggtttttataccttatgttggagga
gttgaatatgctcatgttttgcttcctcctttagagactctttgtactgttgaagaaaca
tgtgttagagacaaagctgttgagtctttatgtagaattggagctcaaatgaaggagagt
gatttagttgattggtttactcctttagtcaagagactggcaggcggggagtggtttaca
gctcgagtttcttcgtgcgggttgtttcccattgcttaccctagtgctccagaaatgttg
aagacagaactcaggtctatctacagccagttgtgtcaagatgacatgccaatggtcagg
agatccgccgcgtccaacttgggaaaatttgctgcaacagttgaacaaactcatttgaaa
agtgatatcatgtcaatatttgaagatttgacacaggatgatcaagattctgttcgacta
ttggctgtcgagggttgcgcagcacttggaaaacttttggaacctcaagactgtgtggct
cacatcctcccagttattgttaatttttcacaggataagtcttggcgtgtccgctatatg
gttgccaatcaattatatgagctttgtgaagctgttgggccagaacctaccaaaacggat
ttggttccagcatatgttcggctacttcgggataatgaggctgaagttcgaatagcagct
gctggaaaagtgacaaaattttgccgaatcttgaatccacaacttgcaattcagcatatt
cttccttgtgtaaaggaattgtcatcagattcttcccaacatgttcgctctgctttggct
tctgtgataatgggaatggcaccagtattaggaaaggatgctacaattgagcaactactt
ccaatttttctttctctcctgaaggacgaattccctgacgtccgcctcaacataattagc
aagcttgatcaagtcaatcaggtgattggaattgatctattgtcccagtcgttgttacca
gccattgttgagctagcagaggatagacactggagagttcgtcttgccataatagagtat
atccccttattggcaagtcaattgggtgttggattctttgatgataaacttggtgcactt
tgcatgcagtggttagaagataaggtatattcgattcgtgatgcggctgcaaataactta
aaacgcctcgctgaggaatttggtccagattgggcaatgcaacacattattccacaggtt
ttggagatgataaaaaacccacattatctatatcgtatgacaattatacatgcaatatct
ctacttgctccagtcatgggctcagaaattacatgctcaaaacttttgccgttgattgtg
gatgcctccaaggatagggtacccaacatcaaattcaatgtagctaaggtgttgcagtca
ctgattcccatagttgatcaatccgtggtggagcagacaattcgtccatgtttggttgag
ctgagtgaggacccagatgtggatgtcagattttttgctagccaagcacttcaatcaagc
gaccaagtcatgatgtcaagttag
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