Papaver somniferum (opium poppy): 113303365
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Entry
113303365 CDS
T05758
Name
(RefSeq) U3 small nucleolar RNA-associated protein 21 homolog
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113303365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psom03009
]
113303365
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
113303365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
EIF3I
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_VPS8
Beta-prop_SCAP
NBCH_WD40
PEP5_VPS11_N
Beta-prop_WDR75_2nd
WD40_RFWD3
VPS8_N
VID27
Beta-prop_LRRK2
Nbas_N
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
113303365
NCBI-ProteinID:
XP_026408179
LinkDB
All DBs
Position
8:146099661..146107469
Genome browser
AA seq
907 aa
AA seq
DB search
MGIFEPFRAIGYITSNVPYSVQRLGTENFVTVSVGKAWQIYDCAKLTLVLVGPQLPRKIR
ALASYRDYTFAAYGNDIAVYKRAHQVATWSRHSEKVNHLLLFGDHILSIDIKGNLFMWAF
KGIEENLAPVGHILLDGKFTPSCIMHPDTYLNKVIIGSQEGSLQLWNVSSKKKLYEFKGW
NSSICCCVSSPALDVVAVGCGDGNVHVHNLKYDEELITFTHSTRGAVTALSFRTDGQPLL
ASGGSSGVISIWNLEKRKLQSVVRDAHDSSIVSLHFFANEPVLMSSSVDNSIKMWIFDTT
DGDPRLLRFRSGHSAPPRCVRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVSKR
AKKLRVKEEEIKLKPVICFDFAEIRERDWCNVVTCHMDTSRAYVWRLQNFVIGEHILTPS
TSERTPIKACAISACGNFAFLGTEGGWIERFNLQSGQSRGSYGDMSESRNYAHDSEVVGV
ACDATNSLMISAGYHGDIKVWDFKGRHLKSRWDVGSSVVKIGYHRANGLLATVSDDMVIR
VFDVVALRMVRKFEGHTDRVTDMCFSEDGKWLLSSSMDGTLRVWDVILARQIDAIHVDVS
ITALSLSPNMDVLATSHVEQNGVYLWVNQAMFSGSSNVDSYASGKNVVSVKLPAVSSNGD
ADNDSDNATGNQSQNKDTVGAPRLDYQIPDLVTLSLLPKSQWQSLINLDIIKMRNKPIEP
PKKPEKAPFFLPTVPTLSGDIVFKPSDSTLEEKKENREALGNHTRDHNLPASKFLQLLKT
SAETKSFAVFTKYIKDLSPSALDMELRMLQIVDDEDEQEPEKRPEMHFIELLLDYFIHET
SCGNDYEFIQAVIRLFLKIHGETVRCRTQLQNKAKELLEVHSPTWQRIDKMFQSTRCMVS
FFSNAQF
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgggaatttttgaacctttcagagccattggttatatcacaagtaatgttccgtattca
gttcagagattgggtactgaaaattttgttactgttagtgttggtaaagcttggcagatt
tacgattgtgctaagctgactttggttcttgttgggccgcaattaccaaggaagatccgt
gctcttgcatcgtatcgtgactatacgtttgctgcgtatgggaatgacattgcagtttat
aagcgtgctcatcaggtagcaacttggagtaggcatagcgagaaggtcaaccatttgtta
ttgtttggagaccacatcttaagcattgatattaaagggaatctgttcatgtgggcattc
aaagggattgaggaaaatcttgctccagttggacacattttgttagacgggaaattcact
cctagctgcataatgcatccagatacgtacttaaacaaggtgataataggaagccaagaa
ggttcattacagctttggaatgttagctcaaagaagaaactatatgagttcaagggatgg
aattcatccatctgttgttgtgtttcatcacccgccttggatgttgttgcagtaggttgt
ggggatggcaatgttcatgtccataatcttaagtatgatgaggagttaattacatttaca
cattctacaagaggtgctgtgaccgccttgtctttcagaacagatggacagcctcttcta
gcatcgggaggttcatcaggtgttataagcatatggaatcttgagaaaagaaagcttcag
tcagttgtaagagatgctcatgacagttcaatagtatcgctgcatttctttgctaatgag
ccggtgcttatgagttcttcggtagataactccataaagatgtggatctttgatacaact
gatggggatcctcgccttttacgctttcgaagtggccatagcgcacctccacgctgtgta
aggttttatgcaaatggaagacacattctatctgctggtcaggatcgtgcctttcgtctt
ttctctgttattcaggatcaacaaagtagagagctttctcagcgtcatgtatctaaaaga
gccaagaaactgagggtgaaggaagaagagataaaattgaagcctgtaatttgttttgat
tttgctgaaattcgcgaacgtgattggtgcaatgttgttacttgtcatatggatacatca
cgggcatatgtatggaggcttcagaactttgtcattggtgagcatatcctgacaccatca
acgagcgagcgaacacctattaaggcttgcgcaatcagtgcttgtggaaattttgcgttc
cttgggacagagggtggatggattgagcgttttaatctccaatcaggacagagcagaggt
agttatggtgacatgtctgaaagcagaaactatgctcatgacagtgaagtggtcggggtt
gcttgtgatgctacaaactctcttatgataagtgcgggatatcatggagatataaaggtc
tgggatttcaaggggcgtcatctgaaatctaggtgggatgtgggttcctctgtagttaag
attggttatcacagagcaaatggtctcttagctactgtgtcagatgatatggttatccgt
gtgtttgatgttgtggccttaagaatggttcgaaaatttgaaggtcatacagatcgcgtt
acagacatgtgcttcagcgaagatggtaaatggttattgtcatctagtatggatggcact
cttagagtctgggatgttatcttggcaagacagatagacgcaatccacgttgatgtatcc
attactgcattgtctctttcacccaacatggatgtcttagcgacttctcatgttgagcag
aacggggtctacttgtgggttaatcaggcaatgttctccggttcctctaatgtggattca
tatgcgagtggtaaaaatgttgtgagtgtcaaactgccagctgtctcttcaaatggagat
gccgataatgattctgataacgctactgggaaccagtcacaaaacaaagatactgttggt
gccccacgtctagattaccaaatacctgatcttgttaccttatcattgttgccaaagagc
cagtggcaaagcttgatcaatttggacattataaagatgcgtaataaaccaattgagcca
cctaaaaagccagagaaagcacctttcttcttgcctacggttccaactctatcaggagac
atagtgttcaagcccagtgattctactttggaggagaagaaggaaaatcgtgaagcactg
gggaaccacacgagagatcataatttaccagcttccaagtttctgcaacttcttaaaacc
tctgcggaaacaaaaagttttgcagtattcacaaaatacatcaaggatttgtccccatca
gctcttgatatggagctccggatgcttcagatcgtagacgatgaagatgaacaggagcct
gagaagagaccggagatgcatttcattgagctgctattggattacttcattcatgagact
tcctgcggaaacgactacgagttcatccaagcagtgatcagactgtttctgaagatacat
ggcgagacagttcggtgccgcacacaactacagaacaaggcaaaggaacttctagaagtt
catagtccaacatggcagagaatagacaaaatgtttcaaagtacaagatgcatggtttca
tttttcagcaatgcacaattttaa
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