Papaver somniferum (opium poppy): 113303375
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Entry
113303375 CDS
T05758
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113303375
04121 Ubiquitin system [BR:
psom04121
]
113303375
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113303375
Membrane trafficking [BR:
psom04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
113303375
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113303375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-RING_5
zf-HC5HC2H
Zf_IFT144_1st
Anti-TRAP
DUF1272
Zn_Tnp_IS91
HypA
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
113303375
NCBI-ProteinID:
XP_026408192
LinkDB
All DBs
Position
8:complement(146331910..146334962)
Genome browser
AA seq
383 aa
AA seq
DB search
MAFVIRQRSGGRMYYCYQCERTISISVTASDLVCPNCNGEFIEEVENPNPNPSPFLSFSE
TTHPLGGGGAGGGFPNPFAGIPLFSSASTTSSMEFQNPMNLFTMLEQAMDARNPTQNQTQ
NQTQNQNRSSSQTGGGSNDPDVFNPLMFFQNYINSMAGGGANIQFVIENNPMDGELGGGG
GGGFGLPSNLGDYFLGPGLEQLIQQLAENDPNRYGTPPAAKTAIEKLPTVSITEEILSSD
SSQCAVCKDEFELGSVTKQMPCKHIYHPDCILPWLELHNSCPVCRYELPTDDPDYEQRSR
ETAENPSRGGGTGSGDAVPNTPRTTERRFRISLPWPLFEQTPRAGASGSGVDNTSNNNNN
NDGSRNSSNQGSGDVQPSFEELD
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggcattcgtaataaggcaacgaagtggaggtagaatgtattattgttatcaatgtgaa
cgtacaatttcaatttcagtaacagcgtctgatttggtttgccctaattgtaatggtgag
tttattgaagaagtcgaaaaccctaaccctaatccaagccctttcttgtcattctctgaa
actactcatcctcttggtggtggtggcgctggtggtgggtttcctaacccgtttgctggt
attccgctattctcgtctgcttctacaacttcttcaatggagtttcaaaaccctatgaat
ctatttactatgcttgaacaagctatggatgcaagaaacccaactcagaatcaaacccag
aatcaaactcagaatcaaaaccgatcgtcttctcaaactggtggtgggtctaatgatcca
gatgtttttaatcctcttatgttttttcagaattatattaatagtatggctggtggtggt
gccaatattcagtttgtgattgagaataatcctatggatggcgagcttggtggtggtggt
ggtggagggtttggtctgccatcgaatttaggggattatttcttgggtcctgggcttgaa
caattgattcaacagttagcagaaaacgatcccaataggtatggaacaccacctgctgcc
aaaacagcaattgagaaattaccaactgtgagtatcactgaggaaatactatcatccgat
tcttctcaatgtgctgtgtgtaaagatgagtttgaattagggtctgttactaaacagatg
ccctgtaagcatatctatcatcctgattgtatcctgccttggctggagttgcataattct
tgccctgtttgtcgatatgaattgccaactgatgatccagattatgagcagcgaagtcga
gaaactgcagagaatccttcacggggtggagggactggttctggtgatgcagtgcctaat
acccctagaacaactgagaggaggtttaggatttcacttccttggccactatttgaacag
acaccaagagcaggggcaagtggcagtggggttgacaataccagcaacaacaacaacaac
aatgatgggagtaggaactcgagtaatcagggaagtggggatgttcaacccagttttgaa
gaattggattga
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integrated database retrieval system
