Papaver somniferum (opium poppy): 113303383
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Entry
113303383 CDS
T05758
Name
(RefSeq) nijmegen breakage syndrome 1 protein-like
KO
K10867
nibrin
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113303383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psom03032
]
113303383
03400 DNA repair and recombination proteins [BR:
psom03400
]
113303383
DNA replication proteins [BR:
psom03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
113303383
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
113303383
BRCA1-C complex
113303383
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FHA
BRCT
Yop-YscD_cpl
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
113303383
NCBI-ProteinID:
XP_026408199
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All DBs
Position
8:complement(146429522..146436544)
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AA seq
542 aa
AA seq
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MVWGLFPVESLPGEQKYFIFSKGTYKVGRRGCDVIINTDKGVSRVHAEVVVNSMTSLDPL
HGNSSNFSLDVHIKDLSKYGTFINKKQGSKANVHDHPNKETTLKDGDLISFGTGNATYRF
CFVPLIFFVYRSIPPKVDRSLQEQISSIGASATHNWKSGCTHALVDDSAPVEEDLLDAIM
AQKPVILNKWIKVVAEKNISSELPSFADCLPTLMLEGSPVKVVDPKSRENCLAGYTFLFG
ELYLYTFGEQLQSLLDVAGSKYLSVNGFCSTSQASQDGASNRVVLVIPARSENQFNGQQH
IRSLPRLTDVKLISAILSGQLDPSAVESPPILVSSSCSTDETIVADSDVEMDTATTHGVT
ANAHLVTPKNEDEPTINVDIANDPTISDEAMPPVSHANSPTSKFQSLSSKVEDGVMIEKM
DKDDEYDTSVVQNSDIVYTQDLIVRDTNPPASFVSTTIRGVVNFKCFRRRETESGNSYRC
LIPFSKNPYRESEYGNEEVAEHVKEEKKRKQMEAISEDLFNNDKSRRRGAAGTSIRELLT
RG
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggtttggggtttgtttcccgttgaatctcttccaggtgaacagaagtactttattttc
tcaaagggaacatataaagtagggcgaagaggttgtgatgtgataattaatactgacaaa
ggagtatcccgggtccatgcagaggtagttgttaattcaatgacttcattggatccactg
catggaaattccagtaacttttcgttagatgtccacattaaagacttgtcgaagtatgga
acatttattaacaagaaacagggatccaaggcaaatgttcatgatcatccgaataaagaa
acaactttaaaagatggggacctgatatcatttggaaccggtaatgcaacctacaggttc
tgttttgttccgctcatattttttgtgtatcgctcgattccccccaaagtggatcgatcc
cttcaagaacagatttcctcaattggtgcaagtgcgacccataattggaagtcagggtgc
acacatgcactagttgacgactctgcaccagtcgaagaggatctacttgatgctatcatg
gctcaaaagcctgtaatcctcaataagtggatcaaggtggtagcagagaaaaatatctct
tctgaacttccaagctttgccgactgtctgccgaccttgatgttagaaggatcaccggtt
aaagttgtggatcccaaatctcgagagaattgtttggcgggttacaccttcttgtttggc
gaattatacttgtatacatttggtgagcagttgcagtccttattagatgtagctggctcg
aaatatctctcggttaatgggttttgttcgactagccaagcatcacaagatggagctagt
aaccgtgtggttctagtgatccctgcacgatcagaaaatcagtttaatggccagcaacat
atccgttcgttacctagattaactgacgtgaaactaatatctgccatcttatctggtcag
ctagacccatctgctgtggaatctcctccaatacttgtctcgtcttcatgctccaccgat
gagacgatagtagcagattctgatgtagaaatggacacggccacaactcatggtgtcact
gcaaatgcccatttagtaactccaaaaaatgaggatgaaccaactataaatgtggatatt
gccaatgatccaacaatcagtgatgaggcaatgccacctgttagtcatgccaacagtcca
acatctaagtttcaaagtttaagttctaaggttgaggatggtgtgatgatagagaaaatg
gacaaggatgatgagtatgacacatctgttgtacaaaattcagatattgtatatacgcaa
gatttgattgttcgagataccaacccaccagcttcatttgtgtctaccacaatcagagga
gtggtgaatttcaaatgcttcaggagaagagagacagagtcgggaaatagctacagatgt
ctgattccattctcaaagaatccttacagggaatctgagtatgggaacgaggaagtagct
gagcatgtaaaagaagaaaagaagcggaaacagatggaagcaatttctgaggatttattc
aataatgataagtcccggagacgtggagcagctggtacttctattcgtgaattgcttacc
cgtggctga
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