Papaver somniferum (opium poppy): 113303409
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Entry
113303409 CDS
T05758
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 36b
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113303409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psom03009
]
113303409
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
113303409
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
Methyltransf_31
Methyltr_RsmB-F
PCMT
Motif
Other DBs
NCBI-GeneID:
113303409
NCBI-ProteinID:
XP_026408225
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All DBs
Position
8:147230539..147234429
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AA seq
307 aa
AA seq
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MRPPMTRGRGGGGFRGRSDGGGRGGGRSFGDGGRGGRGGRGGDRGRGGGRGRGGGRGGGR
GAGGMKGGSKVIVEPHRHEGVFIAKGKEDALVTRNMVPGEAVYGEKRVSVQNEDGTKIEY
RVWNPFRSKLAAAILGGVDNIWIVPGARVLYLGAASGTTVSHVSDLVGPTGVVYAVEFSH
RSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFL
KNGGHFVISIKANCIDSTVPAEAVFAQEVKKLQQDQFKPSEQVTLEPFERDHACVVGGYR
VPKKQKA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgccaatgaccagaggacgtggtggtggtggatttagaggaagaagtgatgga
ggaggtagaggaggaggaagaagtttcggtgatggaggtcgtggtggtagaggaggtcgt
ggtggagatagaggaagaggtggtggtcgtggtagaggaggaggtcgtggtggtggacgt
ggtgctggtggaatgaaaggtggaagcaaagttattgtagaaccacatagacatgaaggt
gtttttattgccaagggtaaagaagatgctcttgttactaggaatatggttcctggggaa
gctgtatatggtgaaaagagagtttcagttcagaatgaagacggaacaaagattgaatac
agagtctggaatcctttcagatctaagcttgctgctgctattcttggtggtgttgataac
atttggattgttccaggagctagggttctatatcttggggcagcttcaggaactactgtc
tctcatgtctctgaccttgttggaccgactggagtggtgtatgctgttgagttttcacac
agaagtggaagagatctagttaacatggcaaagaagagaacaaatgttattcccatcatt
gaagatgctaggcatcctgctaaatacaggatgttggtaggcatggttgacgtcattttc
tctgatgttgcccaacctgaccaggctagaatcttagctctgaatgcttcgtatttcctc
aagaatggaggtcactttgtgatatcaatcaaggcaaactgtattgattctacagttccg
gctgaggcagtctttgcccaagaagtgaagaaactgcagcaggaccagttcaaaccatct
gagcaggttactcttgagccctttgagcgagaccatgcttgtgttgttggtggttacaga
gtgcccaagaagcagaaggcctag
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