Papaver somniferum (opium poppy): 113303673
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Entry
113303673 CDS
T05758
Name
(RefSeq) coatomer subunit beta'-1
KO
K17302
coatomer subunit beta'
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113303673
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psom04147
]
113303673
Membrane trafficking [BR:
psom04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
113303673
Exosome [BR:
psom04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
113303673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_HPS5
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_WDR75_2nd
WD40_RFWD3
Beta-prop_WDR35_TULP_N
TPR_GEMI5
Beta-prop_SPT8
HEAT_GCN1
WD_LRWD1
TPR_1
Beta-prop_DCAF12
TPR_2
Motif
Other DBs
NCBI-GeneID:
113303673
NCBI-ProteinID:
XP_026408518
LinkDB
All DBs
Position
8:complement(157745781..157757107)
Genome browser
AA seq
909 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGSVCIWNYQSQTMTKSFEVTDLPV
RSAKFIARKQWVVAGADDMHIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYYTGGDKPYLITGSDDHTAKVWDYQTKSCIQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAVGYMKSSRRVVIGYDEGTIMIKIG
KEVPVASMDSSGKIIWAKHNEVQTVNIKSVGADYEITDGERLPLAVKELGSCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSTDGEYAVKESTSRIKIFSKTFQ
ERKSIRPTFSAERIFGGTLLAMCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVTI
TSDTSFYMLKYHRDVVANFLDTGGEIGEEGVEDAFELLNEVNERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVYLIDKEFNVIGYTLLLSLIEYKTLVM
RGDLERASEVLPSIPREHLNSVARFLESREMLEDALEVATDPNYRFDLAIQLGRLEVAKA
IAAEVKGESKWKQLGELAMSSGKLEMAEECLRNAKDLSGLLLIYSSLGDAEGIQELASLA
KEQGKNNVAFLCLFMLGKVEECLQLLVDSNRIPEAALMARSYLPSKVSEIVALWRNNLNK
VNQKAAESLADPEEYPNLFEDWQVALSVESKISEIRGIHPPAADYLSYIEKSNINLMEAF
KTMQLDEEEEAPLENGDLAHEEVEENGEEHEEQGTQEEEAVEVDADSTDGAVLVNSNEAE
EEWVLAPRY
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttagactcgaaatcaagaggaaactcgctcaaagatcagaaagagtaaaatct
gtcgatctacatcctacagaaccatggattcttgcaagtctttattctggaagcgtttgc
atttggaattaccaatcacagactatgacgaagtcctttgaagtcacggatttaccagtt
cgctcagcaaaatttattgcacgtaaacaatgggttgtcgctggagctgatgacatgcat
atccgggtatacaattacaacacgatggataaagtcaaagtatttgaagcacacacggac
tacatcagatgcgtggctgtccatccaactcttccttatgtgttatcatcatctgatgac
atgcttatcaagctttgggactgggagaaaggttggatgtgtacccaaatatttgagggc
cactcccactatgtcatgcaagtgacttttaatccaaaagacaccaacactttcgcgagt
gcctctctagatcgcacgataaagatttggaatcttggctctcccgacccaaattttacc
ttggatgcccatttgaaaggagtaaactgtgtcgattactacaccgggggtgataagccg
tacctaatcactggttctgatgatcatactgctaaggtgtgggattaccaaacaaaaagt
tgcattcagacacttgaaggtcacacacacaatgtttctgctgtttgtttccatcctgaa
cttccaattataatcaccggttctgaggatggtactgttaggatatggcatgcaaccaca
tataggcttgagaacacattgaattacggtcttgagcgagtgtgggcagttggatacatg
aaaagttcgcggagggttgtaattggatacgatgaaggaaccattatgattaaaattggt
aaagaagtaccagttgctagtatggacagtagtggaaaaatcatatgggccaagcataat
gaggttcaaactgtgaatattaaaagtgttggagcagattacgagatcactgatggagag
cgattacctttggctgtaaaagagttggggagctgtgatctttaccctcaaagcttaaag
cacaatccgaatgggaggtttgtcgttgtatgcggggatggcgagtacattatatatacc
gctttggcatggagaaatagatcctttggatctgcattagagtttgtgtggtcaactgat
ggagaatatgctgtcaaagaaagtacttcaaggattaagatattcagtaaaactttccag
gaaaggaaaagcataagaccaactttttctgctgaacgcatttttgggggaaccttgcta
gcaatgtgttcgaacgactttatatgtttttacgattgggctgagtgcaggttgattcgt
cgaattgatgtcaatgtcaaaaatctttattgggctgatagtggtgatttggtgacaatt
accagtgacacatcattttacatgctgaagtaccatcgggacgttgttgcaaattttttg
gataccggaggagaaattggtgaggagggtgttgaagatgcttttgagcttctcaatgaa
gtaaatgagcgagttcgaacagggttatgggttggagactgttttatctataataactct
tcatggcgacttaactactgtgttggtggtgaggtaacaactatgtttcatctggaccgg
ccaatgtacttgttgggatatcttgcaaaccaaagtcgtgtatacctaatagataaggag
ttcaatgttattggatacacattgcttctaagcttgattgagtacaagactcttgtgatg
cgtggagatttggagagggcaagtgaagttttaccctcaattcctagggagcatcttaat
agtgtggctcgtttcttggaatctcgagaaatgttggaagatgcattggaagtggctaca
gatcctaattatagattcgatctagctatacagcttggaagattagaggttgcaaaggca
atagcggcagaagtaaagggtgaatccaaatggaaacaattgggagaactagcaatgtcc
agtggaaagttagaaatggctgaagagtgcttacgaaatgcaaaggatctgagcggtttg
ttgcttatatactcttcacttggagatgctgaaggaatccaagaacttgcatctcttgcc
aaagaacagggaaaaaacaatgttgcttttctttgtttattcatgctggggaaagtggaa
gagtgtctccaactcttggtggatagcaaccggattcctgaagctgctttgatggcgcgg
tcttatcttccaagcaaggtctcagagatagtagcactttggagaaacaacctcaataag
gttaaccagaaagctgcagaatctttagctgaccctgaggagtaccctaacttattcgag
gattggcaggttgctctatccgtggaatctaaaatttcggagataagaggaattcatcct
cctgctgcagattatctaagctacatagagaaatcaaatatcaaccttatggaggctttc
aaaacaatgcaacttgatgaagaggaggaggcaccacttgaaaatggtgatttggctcac
gaggaggtagaagagaacggagaagaacatgaagagcagggaacccaggaagaagaggct
gttgaggtcgatgctgattctacagatggcgctgttcttgtaaacagtaatgaagctgaa
gaagagtgggttctggcgccacgttactaa
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integrated database retrieval system
