Papaver somniferum (opium poppy): 113303707
Help
Entry
113303707 CDS
T05758
Name
(RefSeq) DNA mismatch repair protein MSH7-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113303707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psom03400
]
113303707
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
113303707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
113303707
NCBI-ProteinID:
XP_026408555
LinkDB
All DBs
Position
8:complement(159235950..159245172)
Genome browser
AA seq
1196 aa
AA seq
DB search
MNRQKSILSYMQKKQEDQKSTIPSNANNFPCQSQKQNQTRFEQFGMGKNNLEDDFVVVGT
DTPPEKLPRKILPSNFKANHPDAAGAAGSSLFSSILHKFSREGHEKPNQRNQGDCGLFNS
SSKISKNDDGLFKQQTPVKNSQTTSIEAKLSDNNFGLGDLSDCGILDDFFGLETPANTRP
LVPRFKRVQQDFMGFNADDDKNVSDFANMKSKRVKLIEEEPVNESKKSTMNKFEWLNDKN
VSDFSDLRSKGVNLFEEEPVIESRKSPTKTFEANKSNFEWLNDKNVSPFPDLKSKRVKFL
EEERANESKKSTTKTFEANMSKFEWLNSSSIRDASGRRPRDPLYDKRTLYIPPDDMKKMS
ASQKQYWSVKCQYMDVLLFYKVGQFYELYELDAEIAHKELDWKLTFSGVGKCRQVGISEA
GIDKAVRTLIGRGFKVGRVEKTETSEQAKTRGRTAIIQRKLVQVVTPATTIDGNIGPDAV
YLLALKEEQCDTENGLIVYGFAFVDCASLKFWVGSITDDASCAALGALLMQVAPKEVIYQ
STGMSKEAQKALNKYSSAGSAKLQLTPSPSDSDFTDASKVRQMIHFKGYFRGSLNSWGSA
LDGVIHRDITISALGGLVCHLSRLMLHDVLSNGEVLPYQVYKGCLRMDGQTLVNLEIFTN
NVDGGSTGTLYKYLDNCVTSSGKRLLRSWICHPLKDAGEINNRLNVVEELMKHSDITLVV
TQCLRKLPDLERLLGRVKAIVRSSASLLLPLLGTKLLKQRIKAFGSLVKGLRVGLDLLMI
LQQKERDISALLNYLVVPPLCGSNGLDEHLTQFEAAVDSDFPKFQDHHVSDCDAETLAVL
IELFVEKAILWSQVIDALSCIDVLRSFAATANSSCGSMCRPVLLPVTSGPMVSCQERGPT
LSIKGLWHPYAFGETVGEVIPNDLHLGEDADRSCPRTLLLTGPNMGGKSTLLRSTCLAVI
VAQLGCFVPGETCMLSPVDTIFTRLGATDRIMTGESTFFIECMETASVLRNATDDSLVIL
DELGRGTSTFDGYAIAYAVFRHLVEKVHCRLLFATHYHSLTKEFSSHPHVSLQHMACSFK
PSTSKSLFKGDQELVFLYRLTSGACPESYGLQVALMAGIPEKLVRAASRAGQVMKASVAE
NFKSSEQRASFSTLHEQWLKTVLALAKGSEEECSSDEDSWDTLLCLWLEMKSLYKD
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgacagaaatcaattctttcatacatgcaaaagaaacaagaagaccagaaatct
acgattccttctaatgctaacaattttccttgtcagtctcaaaagcaaaatcaaacgaga
tttgaacaatttggtatggggaaaaataatctagaagatgattttgtagtggtaggaact
gatactccaccagagaagttgcctcgtaagattctcccttcaaactttaaagctaatcat
cctgatgccgccggtgctgctggatcttctttgttttcaagtatattgcacaaattttca
agggaaggtcatgaaaaaccgaatcaaaggaaccaaggtgattgtggtttatttaatagt
tcatcgaaaattagcaaaaatgatgatggattatttaaacaacaaacacctgtgaaaaac
tcacaaacaactagtattgaagccaagctcagtgataataattttggtttaggggatctt
tcagattgtggaattttggatgatttttttggcctggaaacaccagctaatacacgacct
cttgttcctcgtttcaaaagagttcaacaagattttatgggtttcaatgctgatgatgat
aagaatgtttcggacttcgcgaatatgaaaagtaaaagagtgaagttaattgaagaagaa
ccagttaatgagagcaagaaatccacaatgaataagtttgaatggcttaatgataagaat
gtatcggacttttcggatttaagatctaaaggagttaatttatttgaagaagaaccagtt
attgagagcaggaaatccccgacaaaaacatttgaagctaataagagtaattttgaatgg
cttaatgataagaatgtttctccatttccggatttgaaaagtaagagagtgaagttcctt
gaggaagaacgagctaatgaaagcaagaaatccacaacaaaaacatttgaagctaatatg
agtaagtttgaatggcttaattcttcttcgattagagatgccagtgggagacgacctagg
gaccctctgtatgacaagaggacactttatataccacctgatgatatgaaaaagatgtct
gcatcacaaaaacagtattggagtgttaagtgtcaatatatggatgttctgctcttctat
aaagtgggtcagttttatgagctatatgaattagacgccgaaattgcccataaggagctt
gactggaagcttacatttagtggtgtcgggaaatgcagacaggttggtatatctgaggct
ggaattgataaggctgttcgtacgctgattggtcgtgggttcaaggttggacgagtagaa
aagacagagacatcagagcaagccaaaactagaggaagaactgcgattattcaaaggaaa
ctagttcaagttgtcacaccagcaactacaatagatggtaacattgggcccgatgctgtc
tatttacttgcgttaaaagaggagcaatgcgacactgaaaatggtttgattgtatacgga
ttcgcttttgttgactgtgcctcgttaaagttttgggttggttccataacagacgatgct
tcctgtgcagctttgggggctttgttgatgcaagtggcacctaaggaggttatatatcaa
agcactgggatgtctaaagaagctcaaaaagcgctcaataagtattcatccgcaggttct
gctaagttgcaactgactccttcaccatcagactcagattttactgatgcttccaaggtc
aggcagatgatacatttcaaggggtactttagagggtctcttaattcctggggttctgca
cttgatggtgttattcaccgtgatataaccatctctgcgcttgggggacttgtttgccac
ttatccaggttaatgcttcatgatgttttgtccaatggagaagttttaccgtaccaagtc
tacaagggttgcctcaggatggatgggcagaccctggtaaaccttgagattttcactaat
aatgtcgatgggggctccacaggtactctatataaatatcttgataactgtgtgacatca
tctggtaaacgacttctacggagctggatttgtcatccattaaaggacgcgggggagatc
aataacagacttaatgtagttgaggaactaatgaaacattcagatataacacttgttgtc
actcaatgtttgcgcaagcttcctgacctagagagattacttggccgcgtgaaggctatt
gttcggtcatcggcttctcttcttctacccttacttggaaccaaattactaaaacaacga
atcaaagcatttggctcacttgtgaaagggctgcgggttggactggaccttttaatgatc
ctacagcaaaaagaacgtgatatttcagcattgttaaattatctggttgtaccgccgtta
tgcggtagcaatgggcttgacgaacaccttacccaatttgaagcagcagttgacagcgac
tttcccaaattccaggatcatcatgtttcagactgcgatgctgagactctcgctgttcta
attgaattatttgttgaaaaagctattttatggtctcaagtaattgatgctctcagctgc
attgatgtgctaagatctttcgcagcgactgcaaactcttcatgtgggtctatgtgcaga
cctgttctgctgcccgtcacttctgggcccatggtctcatgccaagagagaggacctaca
ctttcaatcaaagggctctggcatccatatgctttcggagaaacagtgggtgaagtaatt
ccaaatgacttgcatctaggggaggacgcagacagatcttgccctcgtacgttgctgttg
acaggtccaaacatgggtggaaaatcaaccctgctccgatctacatgtttagcagtgatc
gtagcccagctaggctgctttgtgcctggtgagacatgcatgttatcacctgtggatact
atcttcacacggcttggtgcaactgatcgaatcatgactggcgagagtaccttttttatt
gagtgtatggagacagcttctgttcttcgaaatgccactgatgattcccttgttattctc
gatgaactcggtcggggaacaagcaccttcgatggatatgctatagcatatgctgtgttt
cgccaccttgttgaaaaggtccactgtcgattactctttgcaactcactaccattctctc
accaaggaattttcttcccatcctcatgtatcactccaacacatggcctgctcctttaaa
cccagtaccagcaaaagcttgtttaaaggcgatcaggagttagttttcctttatcgtctc
acttctggagcatgtccagaaagttatggattacaagtggctctaatggcagggatacca
gaaaaactagtcagagctgcatcaagagctggtcaagtgatgaaagcatctgttgcagaa
aacttcaagtcgagtgagcaaagggcttccttttcgacgcttcatgaacagtggttgaag
actgtattggctttagcaaaaggctcagaagaagaatgcagttcggatgaagattcgtgg
gatacattactttgtttgtggcttgagatgaagagcttatacaaagactga
DBGET
integrated database retrieval system
