Papaver somniferum (opium poppy): 113303810
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Entry
113303810 CDS
T05758
Name
(RefSeq) transcription elongation factor SPT4 homolog 2-like
KO
K15171
transcription elongation factor SPT4
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113303810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113303810
03019 Messenger RNA biogenesis [BR:
psom03019
]
113303810
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
113303810
RNA polymerase I system
113303810
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
113303810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
HIPIP
TBCC
HPIP_like
Motif
Other DBs
NCBI-GeneID:
113303810
NCBI-ProteinID:
XP_026408680
LinkDB
All DBs
Position
1:complement(147731178..147733774)
Genome browser
AA seq
115 aa
AA seq
DB search
MSNVAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCQFFNMDKDHEMVGECTTSNFTG
IISVMDPTRSWAARWLRIGRFVPGCYTLAVSETLSGELQGICDEHNIPYVPPKRS
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgttgcacagataccaacttctttcggacacgaacttagggcttgccttcgt
tgtaggcttgtaaaaacttacgaccagttcagggaatcgggatgtgaaaattgtcaattt
tttaatatggacaaagatcatgaaatggtgggcgagtgcactacctcgaattttactggg
ataatatctgtcatggatccgacaagaagttgggctgctagatggttgagaatcggaaga
ttcgttcctggttgctacacgcttgctgtttcagagacgctttcaggagaattgcaggga
atttgcgatgaacataatatcccgtacgtccccccaaagcgttcttga
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