Papaver somniferum (opium poppy): 113304024
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Entry
113304024 CDS
T05758
Name
(RefSeq) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113304024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113304024
03036 Chromosome and associated proteins [BR:
psom03036
]
113304024
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113304024
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
113304024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
113304024
NCBI-ProteinID:
XP_026408908
LinkDB
All DBs
Position
8:complement(174577726..174586602)
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AA seq
849 aa
AA seq
DB search
MFSGTSTSNFGGGTPALSLPAVGNTASAPVSSFGTTPAFGTTSAFAGTSIFGQKPASNAN
TPAFGTTPAFATPTTPVFGSQPNTGFGSQPNTLFGSQPNTGFGSQPTAGFGSQQNTGFGG
GFGNLGFGATHAASTTAPPFGAQPLSSRFGQPNSGFGNNPFSSNPAPFGFQSSSISMQTT
TPSTFGTPGFGQPSRGGSRAVPFAPTNTEELLGGKTEIHKFQSISCMPVYAEKSHEELRW
EDYQLGDKGGQITQPNSFTSTTTNPNPFSLGLQKTTTFTGFNTSGTAGSTPSNPFATGTS
LTSTNAFNQPSITPASTPYNFGTTPSFTTTPAFTFGTTPSTATSPFNSIPGAANPFVTPS
AFQQPNTAFAPVSTRSAPLTSTVGTQNSSVWNNTFNSTPAWNSTSIGQTNASQQTTPAFS
FQQQGQTNPAQQTPPAFNFPSSGFQQQGQTNQSQQTPAPAFNFPSSSFQQQGQTNPSQQT
LPAFNFHSSGFQQQQTSSGFGQNTFPQLSTGNQSNPPATQPSGVTMNPFGTLPAMPQISI
GHTRAAPSIQYGISRMPVVEKAEPVRVSPLLMTSRHLSQNRIRLPARRSANNKSSRVPFF
GDDEEPPSTPKADALFIPRENPRALVIRPLEHWTSRVSAEKSKNTNNTPLHENGKVSEKD
LGSSLNGSINHENHKSNPSLAENSNDKERTVNENGADIEALMPKLHYCDYYTEPEIQELA
AKERAEPGFCGKVKDFIVGRHGLRSIKFAGETDVRNLDLESLVQFNNREVIVYLDDSKKP
PVGQGLNKAAVVTLLNIKCFDKKTGQQYLEGVKVEKFKELLMKKTVDQGAEFVSYDPIKG
EWKFRVNHF
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcggcacttcaacgagtaatttcggaggaggaactccggctctttcattgccg
gcggttggaaatacagcatcagccccggtaagttcctttggcacaactccagctttcggt
actacatccgccttcgccggaacttctatatttgggcagaagcctgcttccaatgcaaac
actccggcttttggtacaactccagccttcgctactccaactacaccggtcttcgggtct
caaccaaatacaggattcgggtcccaaccaaatacactattcgggtcccaacctaataca
ggcttcgggtcccaaccaactgcaggattcgggtctcaacaaaatacaggcttcggaggg
ggatttggcaacctaggatttggtgctacacatgctgcttccacaaccgctcctcctttt
ggtgctcaacctttgagttctaggtttggccaaccaaattctggatttggtaacaaccct
tttagttcaaatccggctcccttcggattccaaagttcttctattagtatgcagactaca
acaccctctacatttggaactccaggtttcggtcaaccatcacgtggtggaagcagagca
gtgccattcgctcctacaaataccgaggaacttcttggtgggaagactgaaatacataaa
tttcaatcaatatcttgtatgcctgtttatgcagagaaaagtcatgaagaactgagatgg
gaagattaccagttgggtgataaaggtggtcaaattactcagccaaattcatttacctct
acgacgacaaatcccaacccattttcacttggtcttcagaaaacaactacctttactggt
ttcaacacttcagggacggctggatcaacaccatcaaacccgtttgcaacaggtacatca
ttaacgtcaacaaatgcatttaatcaacccagtattactcctgcatccactccatataat
tttggaactactccttcattcaccaccactccagcctttacttttggaactactccttca
actgcaacctcgccttttaattcaatacccggagcagccaacccctttgttacaccatct
gcattccaacagccaaatacagcctttgcaccagtaagcacaagatctgctcctctgacg
agcacggttggtacacaaaattctagcgtctggaacaatactttcaattcaacgcctgcc
tggaacagtacgagcattggccaaacaaacgcatcgcaacagactaccccagcttttagt
tttcagcaacaaggccaaacaaacccagcacagcagactccgccagcttttaacttccct
agcagcggttttcagcaacaaggccaaacaaaccaatcacaacagactccggcaccggct
tttaacttccctagcagcagttttcagcaacaaggccaaacaaacccatcacaacagact
ctgccagcttttaactttcatagcagtggttttcagcagcaacagacatcaagtggtttt
gggcagaacacctttccccaactgtctactggcaaccaaagtaatccaccagctacacaa
ccatctggtgttacaatgaatccttttggaacacttcctgcaatgcctcaaatatcaatt
ggacatacaagagctgcaccatcaattcaatatggaatatctaggatgcctgtggtcgag
aaagcggaacctgtcagagtttcccccttgttgatgacttctagacatttgtctcagaac
aggattaggctacctgctaggagatctgctaacaacaagagctcaagggtgccatttttc
ggtgatgatgaggaacctcctagcacgccaaaagcagatgcccttttcattccaagggag
aatccaagagctcttgttatacgcccccttgaacattggacctcaagagtctctgcagaa
aaatcaaagaataccaacaatactcctctgcacgagaatggtaaagtctccgagaaagat
ttaggttcaagtttgaatggctctatcaaccatgaaaaccataagagtaatccatcattg
gcagagaatagcaatgacaaggagcggacagtaaatgagaacggggcagatattgaggcg
ctgatgccaaaactccactactgtgactactacacggagcctgagattcaagaattagca
gccaaggagagggcagagccaggattctgcggtaaggtgaaggacttcatcgttggaagg
catgggttacgtagcatcaagtttgcaggagagactgatgtgcgaaaccttgacctggag
tccctggtacaattcaacaaccgggaggtgatagtttacctggatgatagtaagaagccc
ccagttggacaaggactgaacaaggctgcagtggtgacactcctcaacatcaagtgcttt
gataagaaaactggacagcaatacttggaaggggttaaggttgaaaagttcaaagagttg
ctgatgaagaaaacggttgaccagggtgccgagtttgtttcttatgatcccatcaaggga
gagtggaagttcagggtgaaccacttttag
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