Papaver somniferum (opium poppy): 113304349
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Entry
113304349 CDS
T05758
Name
(RefSeq) valine--tRNA ligase, mitochondrial 1-like isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
113304349
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psom01007
]
113304349
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psom03016
]
113304349
Enzymes [BR:
psom01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
113304349
Amino acid related enzymes [BR:
psom01007
]
Aminoacyl-tRNA synthetase
Class I (U)
113304349
Transfer RNA biogenesis [BR:
psom03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
113304349
Prokaryotic type
113304349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
113304349
NCBI-ProteinID:
XP_026409219
LinkDB
All DBs
Position
8:complement(13659662..13668041)
Genome browser
AA seq
1105 aa
AA seq
DB search
MLRHFLGLGFKSRTKLISSRSQFTETRWWSSSSSKIVTNMEENKIDLKKEPEIPKVETAE
ELERKKKKEEKAKEKELKKLKALEKAAAAKNQAQKGAAASKKSEKKIVKKDAVEENLEDY
VDPATNPGEKKHLSRQMAKQYSPTVVEKSWYAWWEKSGYFIADANSTKPAFTIVLPPPNV
TGALHIGHALTAAIQDTICRWRRMSGFNVCWVPGMDHAGIATQVVVEKKIMRDSKRTRHD
IGREDFVKEVWKWKNEHENTILNQERRIGVSLDWSRECFTMDEPRSKAVTEAFVRLYEDG
LIYRDNRLVNWDCVLRTAISDIEVDYKDIKERTLLKVPGYDTPVEFGVLTSFAYPLEYPL
GELKEIVVATTRVETMLGDTGIAVHPEDERYTKLHGKYAIHPFNGRRLPIICDAILVDPQ
FGTGAVKITPAHDPNDFEVGKRHNLEFINILTNDGLINSNGGSAFKGMPRFEARVAVIAA
LEKKDLLRGAQNNEMRLGVCSRTNDVVEPMIKPQWYVNCNGMAKQALDAVVDEKCKKIEI
IPKQYTAEWKRWLVNIRDWCISRQLWWGHRVPAWYVALEDDQLQEYGVYADHWVVGRDEE
EARSEATKKFVGKKFQMIQDPDVLDTWFSSGLFPLSVLGWPDNTADFRAFYPTSVLETGH
DILFFWVARMVMLGMQLSGDVPFRKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGVTLE
NLHKRLEEGNLDPNELVVAKEGQVKDFPNGIAECGADALRFALVSYTAQSDKINLDIQRV
VGYRQWCNKLWNAIRFAMTKLGDNYIPPTKLNPDSLPFSCKWILSVLNKAISKTVTSLES
YEFSDASTAVYSWWQFQLCDIFIEAIKPYFVGDDKFNDERSAARDTLWICLDNGLRLLHP
FMPYVTEELWQRLPQVAGNRAKKESIMISEYPSVVKEWTNEAIENEMDLVETLVKSIRSI
RADLPPNERLGRKPAFVVCRSDAVGDVIRSRELEISTLASLSSFEIVAENDANLATCLVN
VANEHFSTYLQQAQGSLNAEAEREKLIKKKDDIQKQRDALQQKMNSIGYEVKVPEHIRAE
NDKKLAKLLQELKIVEDAFEILEQP
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgttgagacattttcttggtttagggttcaagtcgagaacgaaattaatcagttctaga
agtcaatttacagaaacaaggtggtggtcttcttcttcatctaaaattgtaacaaacatg
gaagaaaacaagatagatttgaagaaggaaccggagattccaaaggtggagacagctgaa
gaacttgagaggaagaagaagaaagaagagaaggccaaggagaaagaattgaagaagtta
aaggcgttggagaaagcagcagcggcgaaaaaccaggcacagaagggtgctgctgctagt
aagaaaagtgagaagaaaattgttaagaaagatgctgtggaagaaaatcttgaggattat
gttgaccctgcgactaatcctggagagaagaaacatctttcccgtcaaatggcaaagcag
tatagtccaacagttgtggagaaatcgtggtatgcatggtgggagaaatcaggttatttt
attgcagatgctaacagtactaaacctgccttcacaattgtactcccacccccgaatgtg
actggggccctacacattggccatgctctaactgctgctattcaggatacaatttgtcgt
tggaggagaatgtctggcttcaacgtttgttgggttccagggatggatcatgctggcata
gcaacacaggtagttgtggagaaaaagataatgcgtgatagtaaaagaacaaggcatgat
attggtcgtgaagattttgtgaaagaagtgtggaaatggaagaatgagcatgaaaataca
atattaaatcaggaacgacggataggtgtctctctcgactggtctcgtgagtgctttaca
atggacgagccaagatcgaaagctgtgactgaagcttttgttcgcctttatgaagatggt
ctcatatatagggataaccgccttgtgaactgggattgcgtcttgcggacggctatatct
gatattgaagtggattacaaagacataaaggaaagaacgctgttaaaggttcccggttat
gataccccagtagagtttggtgtacttacatcttttgcttaccctttggagtaccctttg
ggagagttaaaagagatagttgttgccacaactagagtggagacgatgctaggtgatact
ggcatagctgtccatcctgaagacgagaggtacactaaacttcatggaaagtatgcaatt
catccattcaatggaaggagactgcccattatttgtgacgcaatacttgttgatccacaa
tttgggacaggtgctgttaagatcacacctgctcatgatccaaatgattttgaagttgga
aaacgtcataatctggaatttatcaacatcttgaccaatgatggattaattaacagcaat
ggtgggtcagcttttaagggcatgccgcggtttgaagctcgtgtagctgttattgcggca
ctagagaagaaggatctcttaagaggtgctcagaataacgagatgcgtcttggtgtttgc
tcaaggactaacgatgttgtggaaccgatgattaagccccaatggtatgttaattgtaat
ggtatggcaaagcaagctctcgatgctgttgtggatgagaagtgtaagaaaattgaaatc
attccaaagcagtatactgctgagtggaaaaggtggttggttaacatccgagattggtgc
atttcaaggcaactgtggtggggacatcgtgttccagcatggtatgttgcactggaggat
gaccagttacaagaatatggtgtgtatgctgatcattgggtggttgggagagatgaagag
gaagctcggtccgaggctactaaaaaatttgttggaaagaaatttcagatgattcaagat
ccggatgtattggacacttggttttcttctggattgtttccgttatctgtgctgggatgg
cctgataatactgctgattttagagcattttatccaacttcagttcttgaaactggacat
gacattctcttcttttgggtagcacgtatggttatgctaggaatgcagctcagtggtgat
gtacctttcagaaaggtttacttgcatccaatgattcgtgatgcacacggtcgtaaaatg
tcaaaatctttgggaaatgtgattgatccgcttgaagtaataaatggggtaaccttggaa
aacctccacaaaaggctggaggagggtaacctggatcctaatgagctagttgttgccaaa
gagggacaagtgaaagacttccctaatggcattgctgaatgtggtgcagatgcgctgcgg
ttcgcccttgtctcttatacagctcagtcggataagataaatttggatatccaaagagtt
gttggttatcgacaatggtgcaacaaactgtggaatgccattcgctttgcaatgaccaag
ctcggcgacaattacattcctccaacgaaattaaatccggattctcttccattcagctgc
aagtggatactatcagtgttgaacaaagccatatccaagacagttacgtcactcgaatcg
tacgagttttctgatgcttccacagcagtatattcatggtggcaattccaattatgtgat
atattcattgaagcaattaaaccttactttgtgggggatgataagtttaatgatgaacga
agtgctgcacgtgatactctgtggatttgtttggacaacggtttgcggttgctccaccca
tttatgccttacgttactgaagaattgtggcagcgtcttcctcaagtagctggaaaccgt
gccaagaaggaatcaatcatgatttctgagtacccatcagttgtaaaggagtggacaaat
gaagcaattgaaaatgagatggatctggttgaaactcttgtgaagtcaattagatctatt
cgtgctgatttacctccaaatgaaaggctaggaaggaaaccagcttttgtggtttgccgg
tcagacgctgttggagatgttatcagaagccgtgaacttgagatatcaactcttgcttcg
ttgtcatcttttgagattgtggctgagaatgacgctaaccttgcaacatgtcttgttaat
gttgcaaatgagcacttctcaacttacctacaacaggcccaaggatcgctcaatgcagaa
gctgaacgggaaaaactaataaaaaagaaggatgatatacaaaagcaaagagatgctttg
caacaaaagatgaactctataggttatgaagttaaggttccagagcatattcgcgcagaa
aacgataagaaactagccaaattgttgcaagagctgaagattgtggaagatgcatttgag
attttagaacaaccttga
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