Papaver somniferum (opium poppy): 113304362
Help
Entry
113304362 CDS
T05758
Name
(RefSeq) serine/arginine-rich splicing factor RS40-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113304362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113304362
Spliceosome [BR:
psom03041
]
Common components
Common spliceosomal components
SR proteins
113304362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
RNA_bind
SET_assoc
RRM_Nup35
DUF2129
Motif
Other DBs
NCBI-GeneID:
113304362
NCBI-ProteinID:
XP_026409243
LinkDB
All DBs
Position
8:14916143..14919483
Genome browser
AA seq
366 aa
AA seq
DB search
MRPIFCGNFEYDARQNDLERLFNKYGKVERVDMKSGFAFVYMDDERDAEDAIRGLDRAEF
GRQGRRLRVEWTKQERGIRRPAGSRRSSANSKPTKTLFVINFDPIHTRTRDLERHFDAYG
KILNIRIRRNFAFIQFESQDDATKALDATNMSKLMDRVISVEYAVRDDDERREGHSPDRR
GGRDRSRERGRSPSPYRRDRGSPDYGRAPSPDRRRGSRDSPYRRERASPDYGRGPKESPY
RRDKGSPDYGRGRSPSPVRRRSSRDSPYAREKVVSPGYDCGSLSPVKKRERNDSPARSPS
MSPSKKRGRRHSPYGRERAASPGYRRDPSRSPVRKDETNGSPNGKAESPAYERHRSRSPV
EDCERS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctatattctgtggtaatttcgagtatgatgcacgccagaatgacctcgagaga
cttttcaacaagtatggaaaggttgagcgggttgatatgaagtctggatttgcgtttgtg
tatatggatgatgaacgagatgctgaggatgcaataagaggactggaccgtgcagaattc
ggtagacaaggtcgtcgacttcgcgttgagtggacaaagcaagaaagaggtattaggagg
cctgcaggctcaaggagatcctctgccaattcaaagccaacaaaaaccttgtttgttatc
aactttgatcctattcacactaggacaagggatttggagaggcactttgatgcatatgga
aagatcttgaatataagaattcgaaggaattttgcatttattcagtttgaatcacaggat
gatgccaccaaagctttggatgcaacaaacatgagcaagttgatggatcgagttatttcg
gtggaatatgctgttagagatgatgatgaaagaagagagggccacagccctgaccgaagg
ggtggtagagatagatctcgtgaacgtgggagatctcctagtccttacaggagggataga
ggcagtcctgattacggccgtgctcctagcccagacagaaggcgtgggtcgagagacagt
ccttacagaagagagagagccagtccagactatggtcgtggaccaaaggagagtccatac
cgcagagacaagggaagtcctgactatgggcgtggccgaagtccaagtccagttaggagg
cgttcatcaagggatagtccttatgcacgagagaaggttgttagtcctggttatgattgc
ggaagcctgagcccagtcaagaagcgtgagagaaatgatagtcctgctcgtagcccaagc
atgagcccaagcaagaagcgtggacgacggcatagtccatatggaagagagagagcggct
agccctgggtatcgtcgtgatcctagtcgaagccctgtaagaaaggatgagacaaatgga
agtcccaatggcaaagctgaaagtccagcatatgagagacatcgcagtcggtcacccgtg
gaagattgtgaaagatcatga
DBGET
integrated database retrieval system
