Papaver somniferum (opium poppy): 113304459
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Entry
113304459 CDS
T05758
Name
(RefSeq) WD repeat-containing protein RUP2-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04120
Ubiquitin mediated proteolysis
psom04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113304459
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
113304459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113304459
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113304459
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113304459
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
113304459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_TEP1_C
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_like
Beta-prop_RIG_2nd
YNR034W-A-like
Herpes_gp350_B
Motif
Other DBs
NCBI-GeneID:
113304459
NCBI-ProteinID:
XP_026409373
LinkDB
All DBs
Position
8:20628925..20630207
Genome browser
AA seq
364 aa
AA seq
DB search
MNITHPQQQQQVEEEEEDEKANNEWEFKLSTVISSQSSTSSRAASDTVGVLEFDPSDQLL
ATGGIARKIRIYNISSLLLGDTTSLRQLDHLSACEYYICTPAKLSSIRWKPNTSGSVIGS
GDYDGVVTEYNLEKRVPVFERDEHGGRRIWSVDYSRWIGASGSDDGTTQLWDTRCRGDEC
VAVVQPSVGRSPVCCVEFDPFGSGLIAMGCADRNAYTYDIRKTDNPVSVFVGHEKTVSYV
RFLGEHMMVTAGTDGCLKLWDTANAHSMRTFKGHVNNRSFVGLSVWRHGGLIGCGSESNE
VFVYDKRWSEPIWLGGLEGTLGPGSEDKFVSGVCWRQQVKEDECTLVAGGSDGALQVYVG
KKKA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcactcatccacaacaacaacaacaagtagaagaagaagaagaagacgagaag
gctaataatgaatgggaattcaaactctcaactgttatttcttctcagtcgtcaactagt
agcagagcagcatccgacacggtaggcgtcctcgagttcgacccatcagatcagttgtta
gcaacaggaggaatcgcaagaaagattagaatttataacataagttctctgctgttggga
gataccacgtctttacgacaacttgatcatctttcagcgtgtgaatattacatttgtaca
ccagctaaacttagtagtatccggtggaagccgaatacgtccggaagtgtaatcgggtca
ggagattacgatggcgtcgttacggagtataatctcgaaaaacgagtgcctgttttcgaa
cgagatgaacatggaggtcgccggatatggagtgttgattactcgcgttggattggggcg
tcaggctccgatgatggaactacacaattatgggatacacgttgcagaggtgatgaatgt
gtggctgttgtacaacctagtgtgggtcggagccccgtttgttgtgtcgaatttgacccg
tttggtagtgggttgatcgcaatgggatgtgcagatcggaacgcatacacatatgatatc
cgaaagactgacaatccagtttcagtgttcgttggccatgaaaaaacagtttcttacgtt
agattcttgggagaacatatgatggttacagcaggaactgatggttgtcttaagctctgg
gatacggcgaatgcacattcgatgcgtacgtttaaagggcacgtcaataacaggagcttt
gtcggtttatcggtgtggagacatggtggtttgatcggatgtgggtctgagagcaatgaa
gtgtttgtatatgataagagatggagtgaacctatatggttaggcgggttggaggggacg
ttgggacccggatcagaagacaagtttgtcagtggtgtttgttggagacaacaagtaaag
gaagatgaatgcacacttgtagctggcggatctgatggggctctacaagtttatgtcgga
aaaaagaaggcctag
DBGET
integrated database retrieval system
