Papaver somniferum (opium poppy): 113304498
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Entry
113304498 CDS
T05758
Name
(RefSeq) protein SMG9-like
KO
K18735
protein SMG9
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113304498
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
113304498
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
MMR_HSR1
RsgA_GTPase
ABC_tran
AAA_18
AAA_16
MeaB
Dynamin_N
AAA_22
NTPase_1
AAA_17
AAA_19
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
113304498
NCBI-ProteinID:
XP_026409415
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Position
8:complement(82936986..82940698)
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AA seq
384 aa
AA seq
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MAGAPASSSVNNSSSSLSSSLAPKILLAKPNLTTSTDPSLSSSSLRSRLPSTGSLNLLSD
SWDLHADRVLPFLTENTDFTVIGVIGPPGVGKSTILNEIYGSDGSSSGMLPPFMTQSEEI
RAMAKHCSVGIELRVSSERLILLDTQPIFSPSVLAELMRPDGSSTIALTNGETLSADLAH
EMMGIQLGVFLASICHVLLVVSEGAHDINMWHLMLTVDLLKHGIPDPSSLTPSYSQTPNM
GSEKEPKDNMQEAVIEYLAAPVFVHTKLWDEDLSPDKATWMRKRLSHYFSSSSFKGTKSE
TTAEEQNDYVEPHVINTDNLSSMGMNLVVLPHRNQDDSVTAQYESYVTLIEKLRDQVLSM
NCRPFAKTVSEREWLKNSARIWER
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgcaccggcatcttcttctgttaacaactcttcctcttctttgtcgtcgtct
ttagctccaaaaatcctattagctaaacctaatttgactacttcaactgacccatcctta
tcatcttcgtctcttcgatctcgtttaccttctactggatccctaaatcttctttctgat
tcttgggatctccatgctgatcgagttcttccgtttctgacggaaaacactgatttcact
gtaattggtgtaattggacctcctggtgttggaaaatcgacgattctgaatgaaatctat
ggatctgatgggagttcatctggaatgctcccacctttcatgacgcaatcggaagagatt
agagctatggcaaagcattgttctgtgggtattgaacttagggtttcttctgagaggcta
atacttcttgatacccagcctatattcagtccttctgttttagctgagctaatgcggcct
gatggatcatcaacaattgctttaactaatggagagactctgtctgctgacctagctcat
gagatgatgggtattcagcttggtgtttttctggcatccatttgtcatgtgctgctagtt
gtgtctgagggagctcatgatattaacatgtggcatctgatgctgacggttgacctgctg
aagcatggcataccggatccttcttcattaacgccttcttattctcaaacccccaacatg
ggatccgagaaggaacccaaagataacatgcaggaagctgttatagagtatttggctgct
cccgtttttgttcatacaaagttgtgggatgaagacctatctcctgataaagctacttgg
atgaggaagagactgtcacactatttcagttcttcatctttcaaaggcacaaaatctgag
accacggctgaggagcaaaatgattatgttgaacctcatgttatcaatactgataactta
agttcaatggggatgaatttagttgtactcccacacagaaaccaagatgactccgtaaca
gctcaatatgaaagttacgtaaccttaatagagaagctgcgagatcaggtgttgtcaatg
aactgtcgaccctttgcaaagacggtatccgaacgtgaatggttgaagaactctgctcga
atatgggaacggtaa
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