Papaver somniferum (opium poppy): 113304641
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Entry
113304641 CDS
T05758
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psom03009
]
113304641
03036 Chromosome and associated proteins [BR:
psom03036
]
113304641
Enzymes [BR:
psom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113304641
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
Pre-60S particles
Helicases
113304641
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
113304641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
Soyouz_module
Motif
Other DBs
NCBI-GeneID:
113304641
NCBI-ProteinID:
XP_026409568
LinkDB
All DBs
Position
8:complement(27127085..27131787)
Genome browser
AA seq
710 aa
AA seq
DB search
MPSIALSDINFMDEVKEKKIKKEKKIKLEVENGGTDNGTPAASPSSEKKKSKKSKKISDD
SDDSMKGASTEKKKKKKRKADDEEQEDAVEIENGSASVVENGTAKKSKKQKGNDGAAVVK
DDVEKEDPNALKNFRISAPLKAKLEANNIKALFQIQTMTFNDVLDGFDLVGRARTGQGKT
LAFVLPILESLINGPAKDSRRTGYGRSPSVLVLLPTRELAHQVAADFELYGKSLGLTTCC
VYGGSPYGPQEGALRRGVDIVIGTPGRIKDHVERGNLDFGSLKFRVLDEADEMLDMGFLD
DVELILGKVKDLKTVQTLLFSATLPPRIKNITTRFLKPDKKIVDLVGNEKIKASVNVRHI
VMPCSRDARATVIPDVIRCYGSGGKVIVFTETKGCASDLSGILPGARALHGDIQQATREV
TIAAFRAGKFMTLVATSVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAV
MLYDPRKHNISRIEKDAGVKFEHISAPQATDIATSVAHEISAAILEVSDSVIPAFQSAAE
KLIKTSGLSAVDLLSKALAKASGYTEIKNRSLLNSMENYVTVQLDAGKPVYSPSFVFGVL
RRFLPENQVEAVKGLTLTADGRGAVFDVPTADLDAYLAGQENAANVSIEVLKELPKLQEK
EGGNSRFSRGGGRGYGGGGRGYGGGGGGRGGGGSWGGDRRGGGGGGRWGR
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgccttcaatagcactttctgatatcaacttcatggatgaagttaaagagaagaagatt
aagaaagagaagaagattaagctagaagttgaaaatggcggtactgataatggaacccca
gcagcttctccttcatcagagaagaagaaaagtaagaaaagtaagaaaatttctgatgat
agtgatgattccatgaaaggggcatctacagagaagaaaaaaaagaagaagaggaaagct
gatgatgaagagcaggaggatgctgtggaaattgaaaatgggtctgcgtctgttgttgag
aatggaactgctaagaaatctaagaaacagaaagggaatgatggagctgctgttgttaaa
gatgatgtcgaaaaagaggatcctaatgcactgaagaattttaggatctctgcgccattg
aaagccaagctggaagctaataatattaaagcactttttcagattcaaactatgactttc
aatgatgttcttgatgggtttgatttagtcggtagagctcgtactggtcagggaaaaact
cttgcatttgtgttgccaatattggaatccttaattaatggtcccgcaaaagattcacgg
aggacaggttacggaaggtccccaagtgttctggttcttttacccacaagggaattggca
caccaggtggctgctgactttgagttatatggtaaatcactcgggttaactacctgctgt
gtatatggtggatctccttacggtcctcaagaaggtgcactgagaaggggggttgatatt
gttattggaactcctggaagaataaaggatcatgtcgagaggggaaaccttgactttggc
tcattaaaattccgtgtacttgatgaagctgatgagatgcttgacatgggttttcttgat
gatgttgaacttattctcggaaaggttaaagatttgaagacggtccagacactcctcttc
agtgctacattaccaccacggattaaaaatatcactactaggtttttgaaacccgacaag
aagattgtagatcttgttggaaatgagaaaataaaggccagtgtaaatgttagacatatt
gtcatgccatgctctagagatgccagagcaacagtcattcctgatgtaattcgttgttat
ggcagtggcggcaaggtaatagtttttactgagaccaagggttgtgcttctgacctttct
gggatattgcctggagcgcgtgctttgcatggagatattcaacaagccacccgtgaggtc
acaatcgctgcgttcagggccggcaagttcatgactttagtagccaccagtgtggcagcc
cgtggtttggacatcaatgacgtccagttaatcattcagtgtgaacctccgcgagatgta
gaagcctacattcatcgttctgggcgtactggaagggccggcaacactggagttgctgta
atgctttatgatccaaggaagcataacatctctagaatagaaaaagatgctggtgtgaaa
tttgagcacatatcggctcctcaagccaccgatatcgcaacttctgttgctcatgagata
tccgcagctatccttgaagtttccgacagtgttattccagcatttcagtcagcagctgag
aagctcattaaaacctctggactctctgccgttgaccttctttcaaaggccctagccaaa
gcatctgggtatactgaaataaagaatagatcgcttcttaattccatggaaaactatgtt
acagtacaactcgatgctggaaaaccagtctattcaccatcgtttgtgtttggcgttttg
aggagattcttgcccgaaaatcaggttgaagctgtgaaaggtctaactcttacagcagat
gggaggggtgcagtatttgacgtgcctactgcagatctagatgcatatcttgcaggtcag
gaaaatgcagcaaatgtgagtattgaagttctgaaagaattgcctaagttgcaagagaag
gaaggcggcaacagtagatttagtcgtggcggtggtagaggatatggtggcggcggtaga
ggatatggtggtggcggcggtggaagaggaggtggcggtagctggggaggagatagaaga
ggaggtggcggcggtggcagatggggaaggtaa
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