Papaver somniferum (opium poppy): 113304846
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Entry
113304846 CDS
T05758
Name
(RefSeq) deoxyribodipyrimidine photo-lyase-like isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psom03400
]
113304846
Enzymes [BR:
psom01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
113304846
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
113304846
Prokaryotic type
113304846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
113304846
NCBI-ProteinID:
XP_026409767
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Position
8:32738582..32741883
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AA seq
522 aa
AA seq
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MTSSSSTMAIQPGRFRVLKEGVLPKLLSEQKCGPVVYWMFRDQRVKDNWALIHAVDQANK
GNVPVVVAFNLFDAFKGAKNRQSGFMLKGLRKLQQTLVESFQIPFFLFQGEAVQTIPNFM
RECGASLLVTDFSPLREVRKWKEEMCERVGDAVTIHEIDAHNVVPLWVASGKLEYSARTI
RSKIQKLLPEYLIDFPQHQTPNKKWVGISPLIDWEKLIDDVLRKGAEVPEIEWCEPGEVA
AMEALLGAKNGFLSTTRLKNYNTDRNNPLKPRGLSGLSPYLHFGQISAQRCALEARNVRS
VNPQSVDSFMEELIVRRELADNFCYYQPHYDSLQGAWEWARKTLMDHANDKREHVYTREQ
LEKAKTADPLWNASQLEMVHHGKMHGFMRMYWAKKILEWTNGPEEALSIALYLNDKYEID
GRDPNGYVGCMWSICGVHDQGWRERPVFGKIRYMNYAGCKRKFDVDGYIAYVKRLVGGIK
KRKAEIRISDEVKAKLKSDVVQDLVKGRMQENPSEIVPLLSS
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgacatcatcatcttcaacaatggcgattcaaccaggaagatttcgagttcttaaagaa
ggagtactacccaaattattgtctgaacaaaaatgtggaccagttgtttattggatgttt
agagatcaaagggtaaaagataattgggcattaatccatgctgttgatcaagccaacaaa
ggaaatgtgcctgttgttgttgcattcaatctttttgatgcattcaaaggtgcgaagaat
cgtcaatcagggttcatgttaaagggtcttcgcaaacttcagcaaacattagtagagtcc
tttcaaatcccattcttcttgtttcagggagaagcagtacagacaattccgaattttatg
agagaatgcggagcttcacttttggtaacagatttttcgccattgagggaagttaggaaa
tggaaagaagaaatgtgtgaacgagttggtgatgcagttaccatacatgaaatcgatgcg
cataatgtagttccactgtgggttgcatcaggtaaattagagtacagtgcaagaactata
aggagtaaaattcagaagttgcttcctgagtatctcattgattttcctcaacatcaaact
cctaacaagaaatgggttggtattagtcctttgatagattgggagaaactcatcgacgac
gttttgagaaaaggagcagaagtacctgaaattgagtggtgtgaacctggagaagttgct
gcaatggaagctctacttggtgctaaaaatggattcctttcaaccaccaggttgaagaac
tataatactgatcgcaataacccattgaagccaagaggactttcaggcctttctccttat
ttgcattttggtcagatttcagcgcaacgatgtgcgttggaggctcggaatgttcgcagc
gtcaatcctcagtcagtcgactcgttcatggaggagttgatcgtacgaagagaacttgca
gacaatttttgctattaccagcctcattatgactccttacagggtgcatgggaatgggct
aggaaaactttgatggaccatgcaaatgataagagagaacatgtttatacgagggagcaa
ttggagaaagcaaaaactgctgatcctctgtggaatgcgtcacaactggagatggttcat
catggaaagatgcacggattcatgagaatgtattgggcgaaaaagattttagaatggaca
aatggaccagaagaagcactttctatagctttatacttaaatgacaagtacgaaatagat
ggtagggacccaaatggatatgtaggttgtatgtggtcgatatgtggtgttcatgatcag
ggttggagggaacggccggtgtttggcaagataaggtacatgaactatgcaggatgcaaa
cggaaattcgacgtcgatggttatatcgcgtatgtcaaaaggctagttggcggaatcaag
aagcggaaagcagaaattagaattagtgacgaggttaaggcaaagttgaagtctgacgtt
gtacaagatctggtaaaaggtagaatgcaagaaaatccttcagagattgtcccgttatta
tcttcataa
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