Papaver somniferum (opium poppy): 113305020
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Entry
113305020 CDS
T05758
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113305020
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psom01009
]
113305020
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113305020
Protein phosphatases and associated proteins [BR:
psom01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113305020
Spliceosome [BR:
psom03041
]
Common components
Common spliceosomal components
SR proteins
113305020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
113305020
NCBI-ProteinID:
XP_026409921
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Position
8:8458669..8460712
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AA seq
210 aa
AA seq
DB search
MFVFVLDVTCKRRKVEVKVRGRSRSRSREPGEVVNPGNNLYVTGLSTRVSSSDLEKHFSS
EGKIAECHLVTDPRTRESRGFAFIMMKTVEDADRCIKYLNRSVLEGRLITVEKAKRKRGR
TPTPGRYQGVKDKRGGFGGDRGDHGPIGGRRRSRSYSPRGRPSRDVRDGPPYFRSHRERS
PPRYAPLPYSRPRSPYGRRGEDYPSYERRR
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtatttgtactagatgtcacatgcaagagaaggaaggtcgaggtcaaggtcaga
ggaaggagtcgctcaaggagtcgagagccgggagaagttgttaacccgggtaataacttg
tatgtaactggcttgtccactagggttagttcaagtgatctcgagaagcattttagcagt
gaaggaaagattgcggagtgccatttggttactgatcctcgcaccagggagtctcgtgga
tttgcgttcattatgatgaaaactgttgaggatgctgatcgttgtatcaagtatcttaac
cgctcagttctcgaaggccgcctgattacagtggagaaggcaaaaaggaaacgggggaga
accccaaccccaggaagataccaaggtgtaaaagataaaagaggaggttttggtggtgat
cgtggtgatcatggaccgattggtggtcgccgaagatcacgtagttattcacctcgtgga
agaccatccagagatgttagagatggacctccttatttcaggagtcatcgagagcgatct
ccacctcgttatgctcctcttccatattctcgtcctagatctccttacggtaggaggggt
gaggattatccctcctatgagagacgcaggtaa
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