Papaver somniferum (opium poppy): 113305598
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Entry
113305598 CDS
T05758
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
113305598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113305598
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113305598
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_6
F-box-like
LRR_8
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
113305598
NCBI-ProteinID:
XP_026410403
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Position
1:complement(159037596..159042714)
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AA seq
587 aa
AA seq
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MDSKRKKAYPPEEEDEDNRVVSSFPDEVLERVLVFVKSHKDRSSVSLVCKDWYSAERWSR
THVFIGNCYSVSPEILIRRFPNIKSVTIKGKPRFSDFSLVPLDWGANIHSWLLVFASAYP
SLEELKLKRMTVSDESLEFLGQSFPHFKALSLQVCDGFSTHGLAAIATHCKNLTELDIQE
NAIDDAEGRWLSCFPESFTSLEVLNFASLQSEVNFDALEALVARCKALRVLKVNRGVTLE
QLQRLLARASRLTELGTGSFSQELAPQRYEELAIAFSNCKKLYTLSGLWDVSSLHLPALY
PACTTLTYLNLSEACVQSTELSKLLPNCPNLRRLWVLDSIEDKGLEVVGSSCPLLEELRV
FPVELDPFDMEHVGVTEKGLIAVSCGCSNLHYVLFFCRQMTNAAVATVVQNCPGFTHFRL
CIMTPHEPEYLTGEPMDEAFGSVVKTCTKLQRLSISGLLTDLTFEYIGKYAKNLETLSVA
FAGSSDLGMKCVLEGCPKLRKLEIRDCPFGNEALLSGFEKYESMRSLWMSACKVTMNGCR
LLAGKMPRLNVEVIKHDESDELQAEKVYVYRSVAGPRTDAPSFVLTL
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggattcaaagagaaaaaaggcttatcctccagaggaagaagatgaggataatagggtg
gtatcatcgtttcctgatgaggttttagagcgtgttctggtatttgtgaaatcacacaaa
gatagaagttctgtttctttggtttgtaaagattggtatagtgcagaaagatggagtaga
acacatgtattcattggaaattgttattctgtttcacctgaaatactgattagaagattt
cccaacattaaaagtgtgactattaaaggaaagccaagattctcagatttcagtcttgtt
ccacttgattggggtgctaatattcattcatggttacttgtttttgcatcagcttatcct
tcgcttgaagagcttaagttgaagagaatgacagtaagtgatgaaagtttggagttttta
ggtcaatcatttccacattttaaagccctctctttacaagtctgtgatggattcagtact
catgggttagctgccattgctactcattgcaaaaacttgactgagcttgatattcaagag
aatgccattgatgatgctgaaggcaggtggctaagctgctttcccgaaagcttcacatct
ctagaagtactcaattttgcaagtctccaaagtgaagttaactttgatgctctggaggcg
ctagtggccaggtgcaaagcactgagggtcttaaaggttaatagaggtgtaaccttggaa
cagctacagaggctgcttgcgcgagcttctagacttactgagcttgggactggatcgttt
tcgcaagagctcgctcctcagcggtatgaggaacttgcaattgcattcagcaactgcaag
aaactatacacgctctctggtctgtgggatgttagttctctacacctcccagcactgtat
cctgcctgtaccactctaacttacttgaatttgagtgaggcatgtgtgcaaagtacagaa
ctctctaagctgctcccaaattgccctaatcttcgacgactctgggttttagactcaatt
gaagacaaaggtctggaggttgtaggttcaagttgtccgttacttgaggagctccgtgtc
ttcccagttgagcttgatcccttcgatatggaacacgttggggttacagagaagggctta
attgctgtttcctgtggctgctctaatctccactacgtccttttcttctgccggcagatg
acaaatgctgctgtcgctactgtggtacaaaattgcccaggcttcacccacttccgccta
tgcattatgactccacatgagcctgagtacctgactggggaacctatggatgaggctttt
ggttcagtggtcaagacctgcaccaagctacagaggctttcaatatccggcctattgaca
gatcttacattcgagtacattggaaagtatgccaagaacttggagactctctctgttgca
tttgcaggcagcagtgacttgggtatgaagtgtgttctggaaggatgccctaagctgcgc
aagttagagatacgagattgtccatttgggaatgaagcactactgtcagggtttgagaaa
tatgagtccatgaggtccctttggatgtcagcctgcaaagtcacaatgaatggttgtagg
cttcttgccgggaagatgccaaggctgaatgtagaggtgattaagcatgatgagagcgat
gaacttcaagcagagaaagtttatgtttaccgttctgttgctgggccaagaacagatgcc
ccatctttcgttctcaccctttga
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