Papaver somniferum (opium poppy): 113306160
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Entry
113306160 CDS
T05758
Name
(RefSeq) uncharacterized protein LOC113306160
KO
K23325
transducin beta-like protein 2
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
psom03012
]
113306160
Translation factors [BR:
psom03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
113306160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_2nd
RVT_2
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_EML
EIF3I
Beta-prop_WDR75_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_IFT140_1st
Pep3_Vps18
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Ge1_WD40
Beta-prop_EIPR1
Nucleoporin_N
WD_LRWD1
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
113306160
NCBI-ProteinID:
XP_026410917
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Position
8:146723689..146734641
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AA seq
536 aa
AA seq
DB search
MAVQFHWKIHQLDVSNAFLHGDLQEKVFMTQPPGFVDPNKPSHILLFLFSNQITVALVYV
DDILLTSATSGTLLDNPTEYRSLVGALQCLTWTRPDIAFAVNLAFLMLIGKVVLMTGGPL
EGIVSFWALHFNIPQIPRLSCDNISSLSLAANPVMHSRMKHVHLDYHFIQELVQSKSLDV
FYVHTLDQLTDIFNKGLHSPRLSADGVVRVYKLDNVQSPSFKSLKIPLPAGGQATAVAFS
EASVVVAAQYGSGSNLYLYGEGNSNTVKHRKHEQPKLPGLEMKWVRTKVHQTMAIVTLAG
TTASYDTSGGSPFIVSCSEGSDIILWNGKSGKILGATDTDQLKNSMATISPNGKLIASAA
ASSADVKIWEIIFTKAGSVKEITGVMQLKGHESAVTWLCFSSNSEQIITASKDGTIKVWN
INVRYDFHQDPQIVKVFPIPLHDLTGATLHYDHLDISPDGKILAATHGRILQWLCAETGK
VLNTDYEAHAGKIMAIAWAPKKIRVGRDHKMVLATAGADKRVKIWVVPVDPPHENA
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcagttcagtttcactggaaaattcatcagttggatgtaagcaatgcctttcttcac
ggtgacttgcaagagaaggtatttatgactcaacctccaggctttgtggatcctaataaa
ccgtcacatatacttctctttttgttcagtaaccaaattacagtagcacttgtctatgtt
gatgacattcttctcacaagtgctacttcaggtactttactggataatcctacagaatat
aggtctttagttggagctctgcaatgccttacttggacaaggccagatattgcttttgca
gttaatctggcttttctgatgctgattgggaaggtagtattgatgacaggaggtccactg
gagggtattgtatctttctgggctcttcacttcaacattcctcagattccaagattaagc
tgtgacaatattagttctctgtcattggctgcaaatcctgttatgcactcccgaatgaag
catgttcacttggactaccattttattcaagagttggttcagtccaagtctctcgatgtc
ttttatgttcatactttggaccagcttacagatatctttaataaaggtttacacagtcct
aggttgtctgctgatggggttgtcagggtctacaaattggataatgttcagagtccaagc
ttcaaatcattaaaaattcccttaccagctggaggacaagcaacagcagttgctttctct
gaagcgtctgttgttgtggcagctcaatatggttctggttcaaatttatatctgtatggt
gaaggaaattcaaataccgtgaagcacagaaagcatgagcaacccaaacttcctggtctt
gaaatgaaatgggttcgcacgaaagtccatcagacaatggctattgtgactcttgctgga
actactgccagttatgacacttctggcgggagtccatttattgtttcgtgttcagaaggt
agtgatatcatcctttggaatggaaagagtgggaagattttgggagccactgacacagac
cagctcaaaaacagtatggccacaatatcccccaatgggaagttaattgcctctgcagca
gcttcttcggcagacgtgaaaatatgggagattatatttactaaggctggttcagtaaaa
gaaattacaggagttatgcagctgaagggtcacgagagtgcggtgacttggttatgcttt
tcatctaattcagaacaaatcataacagcatctaaagatggtaccataaaagtatggaat
attaatgttcggtatgattttcatcaagacccgcagattgtaaaggtgttcccaattcca
cttcatgacttaacaggggccaccttgcactatgatcatctcgatatttcgcctgatgga
aaaatattggctgccacccatggtagaatactacaatggctatgtgctgaaaccggaaag
gttttgaacaccgattatgaggcacatgctggaaaaatcatggccattgcttgggcacca
aagaaaattcgtgtgggacgtgaccacaagatggttttagccacagctggtgctgacaag
agagtgaagatttgggtggttccagttgacccaccacatgaaaacgcctag
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