Papaver somniferum (opium poppy): 113306378
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Entry
113306378 CDS
T05758
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psom01009
]
113306378
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113306378
Enzymes [BR:
psom01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
113306378
Protein phosphatases and associated proteins [BR:
psom01009
]
HAD phosphatases
Fcp/Scp phosphatases
113306378
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
113306378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
Motif
Other DBs
NCBI-GeneID:
113306378
NCBI-ProteinID:
XP_026411108
LinkDB
All DBs
Position
1:163692344..163701512
Genome browser
AA seq
974 aa
AA seq
DB search
MFKSMVYEGNSLLGEVEIYPRNQQMDIIMLNKEIRISTYSQPSERCPPLAVLHTIAPNGV
SFKMEASKSQSEDSLLYTLHYSLLGENKTAVMGVGEEELHLVAMPSRRNPSHGACFWGFY
APQGLYNSSLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKITTEMDPQRVSGM
LQEIKRYQDDKNILKQYVETDQIVENGRLIKVQSEVFPALSDNHQPIVRPLIRLQEKNII
LTRINPLIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPES
NLISSNELLNRIVCVKAGLRKSLLNVFHGGICDPKMALVIDDRLKVWDEIDQTRVHVVPA
FAPYYAPQAEANNVVPVLCVARNVACNVRGGFFKDFDESLLQRIIGIFYEDDVEEGPSPP
DVSNFLISEDDGTAANRGPLRFEGMADVEVERKLKDIVPAFSIPNSIDPRFSTLQQFVGS
SSNPTLPQPSTQGSVMPFHDQQLQQQPQAPPSFNPVNRVGPSEASLQNSPAREEGEVPES
ELDPDTRRRLLILQHGQDIREHPPKESPPFPVRPPAPPVPGPPIQSRGNWFPSEEETSPP
KQNRALPKQVQKDFSVESEAMHFENSRPQRSSSFQGTGGSVQSERTFHENLRLPKEVHIG
DDRAKLSRTHPKYQSFSGEEAPLGRSASNNKLSPSPKDEEMPLARLAPSSKDLQTESGRG
TSQYPDTPAKVLQDIAIKCGSKVIFRSALVTSAELQFSIEVWFSGEKIGEGIGKTRKEAQ
RQAAERSLRTLANKYLINAKPDQTTVYGDPNKLSNVDMNGYINDSNSFHQPFLNEDSVPA
SSTSEPSRYLNTRMEESQSNLDPISALKELCMDEGLKLDFRTRPTSSTSLTHKGEAYAQV
EIGGQVFGNGNGLTLDAATAQAAEEALMNLKVKLGQDTHKRIGSPRSLQAAVPNKRFKPE
FPRVLQRIPPSARY
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaatctatggtatatgaagggaattcactacttggggaagtagagatttaccct
cggaaccagcaaatggacattattatgttgaacaaggaaatcaggatctcaacctattca
caacctagtgaaaggtgcccacctcttgcagtacttcatactattgcccccaacggtgtc
agcttcaaaatggaggcatcaaagtcacagtctgaagattcgctattgtatacattgcat
tattctttgcttggagagaacaagactgcagttatgggagtaggagaggaagagctgcat
ttggtggccatgccttccagaagaaatccctcacacggtgcatgtttctggggcttttat
gctccacaggggctttacaactcatctcttgtgatgttgaaccttcgatgtcttggaatt
gtgtttgatctagatgagacactaatagtcgcaaatacgatgcgttcttttgaggacaga
attgatgctttacagcgaaaaataactactgagatggacccacagcgagtttctggcatg
ttacaagagattaagcgatatcaagatgacaaaaatatcttgaaacaatatgtagaaact
gaccagattgtggaaaatgggaggttgatcaaagttcagtccgaagtctttccagctttg
tctgataatcatcaaccaattgttcgtccgcttataaggttacaagagaagaacattatc
ttgactcgcatcaacccgttgattcgtgacacaagtgttcttgtgaggttgaggcctgcg
tgggaggatctgaggagctacttaactgctagaggtcgtaagcgttttgaggtttatgta
tgcacaatggctgaaagagattatgctttagaaatgtggaggcttcttgatcctgaatca
aatttaatcagctcaaatgaactattgaatcgcattgtatgcgtcaaagcgggattgcgg
aaatctttgctgaatgtttttcatggtggcatatgtgatcctaaaatggctctggttatt
gatgatcgtctgaaagtgtgggatgagatagatcaaactagagtgcatgttgttcctgca
tttgctccctactatgctcctcaggctgaggcaaacaatgtagtgccggttctttgtgtt
gcaagaaatgttgcttgcaatgttagaggtggttttttcaaagattttgatgaaagtctt
ttgcaacggattattggcatattttatgaagatgacgtggaagaaggcccatctcctcct
gacgtgagcaactttttgatttcagaggatgatggtactgctgcaaacagaggtccactg
cgcttcgagggcatggctgacgttgaggttgagaggaaattgaaggatatcgtgccagct
ttttcaatccccaatagtattgatccaaggttctcgactcttcagcaatttgtgggttct
tcatcaaacccaacattgcctcaaccttctacgcaaggctcggtaatgccattccatgat
caacagctccaacaacaacctcaggcaccaccatcatttaatccagtgaatcgtgtgggc
ccatcagaagctagcttgcaaaattctcctgccagagaagagggtgaggtccctgaatcg
gaattagatccagatacaaggagaaggcttttgattttgcaacatggtcaagacattaga
gaacatcccccgaaggaatctcctccctttccagtcaggccccccgctccaccagttcct
ggcccgcctatacaatcacgtggaaattggttcccatctgaagaagagactagcccacca
aagcaaaaccgggcattacccaaacaagtacaaaaggatttttctgtagaatcagaagct
atgcattttgaaaacagccgacctcagcgttcatcttcttttcaagggaccggtggttct
gttcaatcagaaagaacatttcatgaaaatctcagattacctaaagaggtacatatcgga
gatgatcgagcaaagttaagccgtacacacccaaaatatcaatccttttcaggtgaggag
gcgccactgggtcgatcagcttcaaacaacaagttgtctcctagtcctaaagatgaagag
atgcctcttgctcggttagccccgagcagcaaggatctgcagactgaatctggacgaggt
acttcacagtatccagacacccctgctaaagttttacaagatattgcaatcaagtgtgga
tcgaaggtgatattcaggtcagccttggttaccagtgcggaattgcagttctcgattgag
gtttggttcagcggggaaaaaataggtgaaggaattgggaagacgaggaaggaagcccaa
cgccaagcagcagaacgctctctgaggactttggctaataaatatttaataaacgctaag
ccagatcaaactactgtgtatggggaccctaacaagctttcaaatgtggatatgaatggt
tatataaatgattcaaattcttttcatcagccatttctgaatgaggactctgtaccagca
tcaagtacatcagagccctctaggtatctgaacacgaggatggaagaatcacaaagtaac
ttggaccccatttctgcccttaaagagttgtgtatggacgaaggtcttaaattagatttt
cgaacacggccaacatcttcaactagtttaacccacaaaggagaagcttatgcccaggtt
gaaataggaggtcaggtgtttggaaatggtaatgggttaacattggatgcagctacggcg
caggcagctgaagaggccctcatgaatctaaaagtcaaacttggtcaggatactcataaa
cgcataggttcgccgaggtcattacaagcagcagttcctaataaacgttttaagccagag
ttcccacgagtattgcaacgaatacctccatctgcaagatattaa
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