KEGG   Papaver somniferum (opium poppy): 113306418
Entry
113306418         CDS       T05758                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7 isoform X1
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03020  RNA polymerase
psom03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    113306418
  09124 Replication and repair
   03420 Nucleotide excision repair
    113306418
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psom03021]
    113306418
   03019 Messenger RNA biogenesis [BR:psom03019]
    113306418
   03400 DNA repair and recombination proteins [BR:psom03400]
    113306418
Transcription machinery [BR:psom03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     113306418
Messenger RNA biogenesis [BR:psom03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     113306418
DNA repair and recombination proteins [BR:psom03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      113306418
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 113306418
NCBI-ProteinID: XP_026411147
LinkDB
Position
1:163776171..163780487
AA seq 177 aa
MFFHIVLERNMQLHPRHFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIR
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAAA
NT seq 534 nt   +upstreamnt  +downstreamnt
atgttttttcacatagtgctggaaagaaacatgcaactgcatcctcgtcatttcggccca
aatctacgtgataagttggtcgcgaagctcatgaaagatgtggaaggcacttgcagtggc
cgtcacgggttcgtggtggcaataacgggggttgataatgttggaaaagggctaattcgt
gatggtacagggtttgtgacgtttcctgtcaagtaccaatgtgtagttttcagacctttt
aaaggagagatacttgaagctgtagtgaccatggttaataagatgggtttttttgctgaa
gctggtcctgttcaaatatttgtgtcgaaccatcttataccagatgatatggaattccag
tctggagatatcccaaattatacaacttcagatggatcagttaaaattcaaaaggatagt
gaagtacggctaaagataattggaactcgagttgatgctacagaaatattttgcattggt
accataaaagatgatttcttgggtgtgattaacgacccgggagcggctgcttaa

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