Papaver somniferum (opium poppy): 113306639
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Entry
113306639 CDS
T05758
Name
(RefSeq) DNA mismatch repair protein MLH1-like isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03430
Mismatch repair
psom03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113306639
03460 Fanconi anemia pathway
113306639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psom03400
]
113306639
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
113306639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
Motif
Other DBs
NCBI-GeneID:
113306639
NCBI-ProteinID:
XP_026411338
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All DBs
Position
8:38987879..38994867
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AA seq
663 aa
AA seq
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MLLSKMVDSSLSKSLMMATYEDLPILCERHTTSKLSVFEDLQSIKSMGFRGEALASMTYV
AHVTVTTITNGQLHGYRVSYKDGVMESEPKPCAAVEGTQMTIENLFYNMTARRKTLQNSA
DDYAKIVDLICRFGVHHTNVSFSCRKHGATRADVHTVATPSRLDAIRSIYGVSVARDLME
VTASDDDQSGSVFKMHGYISNSNYSTKKITMVLFINDRLVDCTSLKRAIEVVYAATLPKA
SKPFIYMSIVLPPEHVDINIHPTKREVSLLNQETIIEKIQMTVESNLRNTNSARTFHTQT
AEPSQSVPLSSSKEANDRSPSASKQENVPVHKMVRTDITDPVGRMHAYLQDAPLSQHERK
SGLNTIRSAVRHRRNPRESADLTSVQQLLSEVDNNCHSGLLDIVKQSTYVGMADNVLALL
QHNTRLYLVNVVNLSKELMYQQVLRRFAHFNAIQLSETAPLSELMMIALKEEDRESKADD
VMKQNIAEMNVELLKQKIEMLQDYFGILIDQRGNLSRLPVILDQYTPNMDHLPEFVLSLG
NDVDWEDEQNCMQSISASLANFYALHPPLLPNPSGEGRQFYKNRTRTGNGEENVNDPRES
EDNLDLELISEAETAWAQREWSIQHVLFPSLRLFLKPPKLMATNGTFVQVASLEKLYKIF
ERC
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgtcaaagatggtggactcaagcttatccaagtctctgatgatggccacgtat
gaagacttgccaattctgtgtgaaagacacacaacatcaaaactatctgttttcgaagac
ttgcagagtataaaatcaatggggtttagaggtgaagcattagctagtatgacttatgtt
gctcatgttacagttactaccatcaccaatggtcaattacatggttatagggtttcttat
aaagatggtgtcatggagagtgaacctaagccttgtgctgctgtggaaggaactcaaatg
acgattgaaaatctcttttacaatatgacggctcgaaggaagacacttcagaactctgct
gatgattatgctaaaatagtggacctaatttgtaggtttggagtacatcacactaatgtg
agcttttcatgtagaaagcatggtgctaccagagctgatgttcacacggtggctacaccg
tcaagacttgatgcaatcagatccatctacggtgtctcagtagcccgtgatctcatggaa
gttacggcttcggatgatgatcagtctggctcagttttcaagatgcatggttacatctca
aattcaaattatagcaccaagaaaattactatggtgctttttataaatgataggttggtt
gactgcacttccttgaagagagcaattgaagttgtttatgctgcaaccctgccaaaggca
tctaaaccattcatatatatgtcaattgtactgcctcctgagcatgtggatattaatatt
catccaacaaagagagaggtaagccttttgaaccaggaaacgattattgagaaaatacaa
atgacagtggagtcgaatttaaggaacactaattcagcaaggacatttcacacacagact
gcagaaccttctcaatctgttcctctgagctcaagcaaggaggccaatgatcgatcaccc
tctgcctctaaacaggaaaatgttccagtgcataaaatggtccgtactgatattacggat
cctgttggaagaatgcatgcctacttgcaagatgcacctctgagtcagcatgaacggaaa
tctggcttgaacacaatacgctctgcagtgaggcatagaagaaatcctagggaaagtgca
gatctgactagcgtgcagcagctcttaagcgaggttgataataactgtcattctgggctg
ctggacatcgtcaagcaatcgacatatgttggaatggcagataatgtcctggctttgctt
caacacaacacccgcctgtatcttgttaatgtagtgaatttgagcaaagagctcatgtat
cagcaagttctacgtcgattcgcccatttcaatgctattcaacttagtgagaccgccccc
ctttcagaattaatgatgattgcattgaaagaagaagatagggaatccaaagctgatgat
gtgatgaagcagaatatagcagaaatgaatgttgagctgctgaagcaaaaaattgagatg
ttgcaggactattttggcattctcatcgatcaacggggaaacttatctaggcttcctgtt
atactggatcaatacacacctaacatggatcatcttccagaatttgtgttgtcgttgggc
aatgatgtggattgggaagacgaacaaaattgtatgcaatcaatttcagcatctctagca
aacttctatgctttgcatcctcctctcctgcccaacccatctggggaggggcggcaattt
tacaagaacaggacacggactggcaatggtgaagagaatgtaaatgatcccagagaatca
gaggataaccttgatcttgaattgatatcagaagctgagactgcatgggctcaacgagaa
tggtccatccaacatgtcttgttcccttccctaagactatttctgaagcctcctaagttg
atggctaccaatggaacatttgttcaggtggcttcactggagaagctctacaaaatcttt
gaaagatgctag
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