Papaver somniferum (opium poppy): 113306677
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Entry
113306677 CDS
T05758
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03013
Nucleocytoplasmic transport
psom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113306677
03015 mRNA surveillance pathway
113306677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113306677
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113306677
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_ACIN1
Nup35_RRM_2
RRM_10
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
113306677
NCBI-ProteinID:
XP_026411367
LinkDB
All DBs
Position
8:39763828..39768690
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AA seq
405 aa
AA seq
DB search
MANPVRRRPVSSGSSGSGSSSRSSSRSRSRSPSRSRSRSKSVSSFSSRSRSGSSPSRSPP
PQRRSPPGAGRRGRSPAPATKRGSPPPRKASPESLMLHVDQLTRNVTEGHLKEIFGNFGE
VVHVELAIDRSVNLPRGFGYVEYKTRADAEKALLFMDGAQIDGNVVRARFTLSPRQKVSS
PTKTVPASQKNDGVDIEKDAPHRQRDSSPRRKPLSPPRRRSPLAPRRGDSPRRRPGTPPR
RRVDSPPRRRMDSPVGRRGSPPRRRPASPIRRRSPSPPPRRYNRSPARASPRRGRGSPVR
RRSPIPVRRRSPPRRLRSPLRRSPVGRRRSRSPIRRPLRSRSRSISPRRGRLPPRRGRSS
SSSASPCPRKGVRRISRSRSPRRPVRGRSSSRSRSSSSSSPPPKP
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccccgttcgacgtagaccagtatcctctggatcttcaggttctggttcatct
tctcgttcatcatcacgatctcgttctcgttccccttcacggtctcgttcccgttccaaa
tctgtctcctcgttttcttctcgttcaagaagtggtagttctcccagtcgaagccctcct
cctcagcgaagaagtcctccgggagcaggtaggagaggtcgctctccagcaccggcaact
aaacgtggatcaccaccacctcggaaagcatctccagaatctttaatgctgcatgttgat
cagctcactaggaatgtgactgagggacatctgaaggagatttttggcaactttggtgaa
gttgtacacgtggagctggcaattgatcgtagtgttaatcttccccgtggatttggatat
gttgaatacaagactagagctgatgcagaaaaagcacttcttttcatggatggggcacaa
attgatggaaatgttgttcgagcaaggttcaccttgtctccacggcagaaggtttcctcg
cctacaaagactgttcctgcttctcaaaagaacgatggtgttgacattgaaaaggatgct
ccacacagacaaagagattcttctccgcgccggaaacctctttcaccaccacgtaggaga
tccccactagctccccgaagaggtgactctcctcgaaggcgaccaggtactcctcctcgg
cgacgggtggattcaccgccgcggcggcgaatggattctcctgttggtcgtcgtggatcc
cctcccaggaggagacctgcatctcctatcagaaggcgatccccatcccctcctccaagg
cggtataatagatcacctgcacgtgcttctcctcgaaggggtcgtggcagtcctgttcgt
aggcgctctcccatcccagttaggcgacgttcccctcctagaagactacgtagtcctctt
agaagatcacctgttggtcgtcgacgtagccgttctcctatacgcaggcctcttcgttca
cggtcacgctcaatctcgccacgcaggggccgacttcctccaagacgtgggagatcttca
tcatcttccgcttcaccgtgtcctcgaaagggagtcagacggatttccagaagtcgtagt
ccaagaaggcctgtgagaggaagaagcagcagccgcagccgcagcagtagcagcagctca
ccacctcctaaaccatga
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integrated database retrieval system
