Papaver somniferum (opium poppy): 113306898
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Entry
113306898 CDS
T05758
Name
(RefSeq) spastin-like
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113306898
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psom04812
]
113306898
Enzymes [BR:
psom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
113306898
Membrane trafficking [BR:
psom04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
113306898
Cytoskeleton proteins [BR:
psom04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
113306898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_14
AAA_22
NPHP3_N
Mg_chelatase
TIP49
AAA_16
AAA_2
MIT
nSTAND3
RNA_helicase
IstB_IS21
nSTAND_NTPase5
nSTAND6
AAA_24
AAA_33
Motif
Other DBs
NCBI-GeneID:
113306898
NCBI-ProteinID:
XP_026411602
LinkDB
All DBs
Position
8:26842746..26846804
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AA seq
498 aa
AA seq
DB search
MNLFKDLFGSIGEILTSLKETDDHQNPQNQSIEKHPAMENISPSIPGSNERIAYKLKSYF
ELGQEVIAKAVKAEEWGLIDDAITHYKNANRILLEAKDTRPPSYISSCEQEKVKTYYQKI
STWQGQVSERLQVLSRRTASSTPSTSKTFVSRPKATVASSFPISGARRNITLAPLLPGRN
NATVRNQADSTVGSKPARESGSYDSKLVEMIETAIVDKSPSVKWEDVAGLEKAKQSLLEM
VIIPTQRPDLFPGGTIRRPPKGLLLFGPPGNGKTMLAKAVASESAATFFNISASSLTSKW
VGEAEKLVRTLFEVAIARQPSVIFMDEIDSIMSTRLANENDASRRLKSEFLIQFDGVTSN
SNDLVIVIGATNKPQELDDAVLRRLVKRIYVPLPDESVRRMLFKNKLKGPAFSIPGGDLE
RLVKETEGYSGSDLQALCEEAAMMPIRELGSKIRTVKPNQIRPLRYGDFKKAMSVIRPSL
QKSKWEELEKWNQEFGSN
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgttcaaagacttatttggttccataggtgaaatcctcacaagtctcaaagaa
accgatgatcatcagaatccacagaaccaatcaatagaaaaacatccagcaatggaaaac
atctctccatcaattcctggttctaatgaaagaatagcgtataaactaaaaagttacttt
gaattaggtcaagaagtaattgctaaagctgtgaaagcagaagaatggggtttgattgat
gatgctattactcattataaaaatgctaatcgtatattacttgaagctaaagatactaga
cctccttcttacatttcatcttgtgagcaagaaaaggtgaaaacttattatcagaagata
tcgacatggcaaggtcaagtttctgagagattacaagttttaagtcgtcgaacagccagt
tctaccccatcaactagcaagacttttgtaagtcggccaaaagcgactgtcgcttcatca
ttcccaatttctggtgctcgaagaaacataacacttgcacctttgctacccggtaggaac
aatgcaacagtgaggaaccaggcagatagtactgtaggatctaaaccggctcgtgaatct
ggtagttatgattcaaagctggttgaaatgatagaaactgcgatagtggacaaaagccct
tcagttaaatgggaagatgttgccggtcttgagaaggcaaagcaatctcttctggaaatg
gttataatcccaacacaaaggccagatcttttccctggtgggactatccgccgaccacca
aaaggtcttcttctctttggtccacctggtaatgggaagaccatgcttgctaaagctgtt
gcatcagagtccgcagctacattttttaatatttctgcatcttctctaacatcgaagtgg
gttggagaagctgaaaagcttgttcgcactcttttcgaggttgcgattgcaaggcagcct
tctgtaatcttcatggatgagattgatagcattatgtcaacaagattggctaatgagaat
gatgcaagtagaaggttaaagtcggaattcttaatccagtttgatggagtgacctcaaat
tctaatgatcttgtgatcgtaattggtgcaactaataagccacaagaattagacgatgct
gttcttcgcagactggtgaagcgtatttatgtacctctaccagatgaaagtgtgaggagg
atgcttttcaaaaataaacttaaaggtccagcattttcaataccaggaggagatctggaa
agacttgtaaaagagacagaaggttattccggaagcgatttgcaagccttgtgcgaagaa
gctgctatgatgccaattagggaacttggatcaaaaattcggaccgtgaagcccaatcag
atacgcccgcttagatatggagattttaagaaagcaatgtctgtgattagaccaagctta
cagaaaagcaagtgggaagaacttgaaaagtggaaccaggaattcggctccaattga
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