Papaver somniferum (opium poppy): 113307647
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Entry
113307647 CDS
T05758
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psom03009
]
113307647
Enzymes [BR:
psom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113307647
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
Pre-60S particles
Helicases
113307647
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GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
HAO_bd
Motif
Other DBs
NCBI-GeneID:
113307647
NCBI-ProteinID:
XP_026411882
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All DBs
Position
9:complement(115491219..115495468)
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AA seq
583 aa
AA seq
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MEASTEAPNRALTKIRFSELDPPLSEPILGALTKSGFNYCTPVQAATIPLLCKFKDVAVD
AATGSGKTLAFVVPLVEILRRSPDKPKPHQVLGIILSPTRELASQIYNVAEPFISTLSNV
KPMLLVGGLGVRADMKKIEEEGANLLIGTPGRIFDIMDRMDILDYRNFEILILDEADRLL
ELGFQKQINSILPRLPKLRRTGLFSATQTEAVGELAKAGLRNPVRVEVKTEAKDELASAS
SKTPLGLEMEYMICEADKKPSQLVDFLTKNMNEKIIVYFMTCASVDYWGVVLPRIAALKG
FSIIPLHGKMNQIARGKALASFTEISSGILLCTDVAARGLDIPGVDLVVQYDPPQDPNMF
VHRVGRTARLGRRGRAIVFLLPKEEEYVDFQRIRRVPLQERICSDDVPDITPQIRTAAKK
DRDVMEKGLKGFVSFIRAYKEHHCSFIFRWKELAVGKLAMGFGLLHLPSMSELKNHSLFT
HGFVPAEDVNVEEIKYKDKNREKQRKRNLKARKEAELEQPKFNKPKRNPKESVTRKQTAK
QRRAVQTVDDAEELDRDYRALKKLKKGTIDEAEFAKLTGAEDF
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggaggcatcaacagaagctccaaatagagccttaacaaaaattcgattctcagagctt
gaccctccattatctgaacctattcttggtgccttaactaagtctggtttcaactattgc
acaccagttcaagcagccacaatcccacttctttgtaaatttaaagatgttgctgttgat
gcagctactggttctggtaaaaccttagcttttgttgttccacttgttgaaatcttaaga
cgttctccagataagcctaaacctcatcaggtgttgggaataattttgtctccaactaga
gagttggcgtcgcagatatataatgttgcggagcctttcatttcgacattgtccaatgtt
aaaccaatgctacttgttggtggattgggtgtaagagctgatatgaagaaaattgaagag
gaaggagctaacttacttataggcacacctgggaggatattcgacattatggatcgaatg
gatattttggattatcgaaattttgagattcttatcttagacgaggctgatcggctttta
gagttgggattccaaaagcagataaattctattctacctcgcttaccaaagcttcgcaga
actggtcttttctcagctactcaaaccgaggcagttggggagcttgctaaagcaggattg
aggaatccagtgagggttgaagttaaaacagaagcgaaagatgagctagcgtctgcatct
tctaaaacaccattgggccttgagatggagtacatgatttgtgaagctgataagaagcca
tcacagcttgttgatttcttgacgaagaacatgaatgaaaagattatcgtctacttcatg
acatgtgcttctgttgactattggggagttgttcttccacgaattgctgctctcaaaggt
ttctccattattcctcttcatgggaaaatgaatcagattgcaaggggaaaagcattggca
tcttttacagaaatttcaagtggtattcttctatgtaccgatgtagcagcgaggggactt
gacattccaggtgttgatttagtcgtgcagtatgatcctcctcaagatccaaatatgttt
gtacacagagttggtcgaactgcacgattaggcagacgaggacgagccattgtttttctc
ttgccgaaggaggaagaatacgtagacttccagcgaatacgaagggtcccacttcaggag
aggatatgttctgatgatgttcctgatattactcctcagatacgaaccgctgcaaagaaa
gatcgtgatgtcatggaaaagggtcttaaggggtttgtctcatttatccgtgcatataag
gagcatcactgctctttcatttttaggtggaaggaactagcagtgggaaagttggcgatg
ggatttgggctgttgcatctcccatcgatgtcggagctgaagaatcactcgctttttacc
catggttttgttccagctgaagatgtcaatgtggaagagatcaagtacaaagataaaaat
cgcgagaaacaaagaaagaggaacctgaaagcaaggaaagaagcagagctcgaacaacca
aagttcaataaacctaagcgaaatccaaaagaatcagttaccaggaaacaaacagccaag
caacgacgagctgttcagacagttgatgatgcagaggagttggacagggactatcgcgct
ctaaagaagctaaaaaagggtactattgatgaagctgaatttgcaaagctgacaggggcg
gaagatttttga
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