Papaver somniferum (opium poppy): 113307695
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Entry
113307695 CDS
T05758
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113307695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113307695
03036 Chromosome and associated proteins [BR:
psom03036
]
113307695
03400 DNA repair and recombination proteins [BR:
psom03400
]
113307695
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
113307695
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
113307695
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
113307695
FA (Fanconi anemia) pathway
Downstream FA components
113307695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
113307695
NCBI-ProteinID:
XP_026411927
LinkDB
All DBs
Position
9:complement(116525557..116532742)
Genome browser
AA seq
1249 aa
AA seq
DB search
MKTTQRLPTWEIFSDDGNSYRWVAHGYDNKTRSDEKPRVVTQHEENPNSRLPSMQDLLFQ
GSSKLLQSNELNNESPPMFRTGLGKSVAVKKSSILKALSVLGEDTVQYGGGQMQGGDNGH
IFSNTVFQTGSGKTANVSVLGEDNVFNGRGDQMQGGDNGHSFSNTVFQTGSGKTVNVSVL
GEDTILNGGGQTQGGGNGHSFSNTVFQTGSGKKVNVSSAGLMRAKTLLGLDGDSSQLSNS
DSEAWGRSFQLEEKIEGRTNAFVTSKSIYTCATDYPTDTYITEDNPEKEVLPSILASEIH
NSSSKPSAIKFQTAGGRSISISDDALRRARSLLGDSEIDLLTNEGSLDTPGFSSFEKDNP
FNKIPLNKESDPSAPCLSQAHTVNSHSSNGILLTKGTYSKHKQFPASLEARNPGDNLVKQ
INGNGLPYRGNCAKDSNIKPSRNEFSSPYMVAGNSRAKDIGSRVKIVGRPLSKPLVDISN
IVGIAPRNGPSEPHVAVRNSLTKDIGSTVNTVGAPPSGPFTDTPNNIGAACGNKKQVTSD
KRKLGSRSSPSPFKRPRCSRFSAPLDRNISFVVPNATCEDSPCKPKVSSKYPFQFARRTI
KEYFGGPPRTSNLLEKIENSVKCMSADRAEAYMFLDASSLDVIGAEGFHQMLVRSGASML
NREWVVNHYKWIIWKLACYGRGYPEKGAMEYLTVLNVLEELKYRYEREVNHAHRSAIKRI
LEGDASAASMVVLCISAVRFNPNQELEAGHGMAPGEEAKKPSSVAKIELTDGWYSVNATL
DVALTNLLIAGKLFVGQKLRIWRASLCGWVAPTSPLEASKTVSLPLHINGTYRAHWAARL
GFCKELGPPLAFRCIKGDGGLVPRTLVGVTRVYPVLYKERLTDVDSVVRSERLENKARQL
YNERRSTIAEGIALELQREVSNSHGKNDSDSEEGAQIFKILEGAAEPDVLMADMSAEQLN
SFSTYKTKQEAIRQSNMQKVVEKALEDAGLNERLVTPFMRVRVVGLTSKDSKGQSCTREG
LITIWSPTEKQQLELVEGQAYIVSGLKPLKLDSNTLYIQANGSTIKWQPLAPLAAASFES
FFSPRKSIFLSNMGEVSLASEFDIAAVVVYVGESYTSCHQKKQWVFVTDDSMSGSKSLAE
GSSNCLLAISFCSPSMGKDSFAAISYTLEGSTVGFCNLVKRAKDQMNNLWVAEATDNSAY
SLFNDLPASSHLKVAATSAYRWAKISSSTIQKLRERVLFILGDSNPPNS
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgacgcagagattaccaacgtgggaaatattctccgatgacggtaatagttac
cgatgggttgctcacggttatgataataaaactagatctgatgaaaaacctagggttgta
actcaacatgaagaaaaccctaattctcgtcttccttcgatgcaagatctcttgtttcaa
ggatcttcaaagctgttacaaagcaatgaattgaacaatgagagtccacctatgtttaga
actggattagggaaatctgttgcggttaagaaatcttcaattctaaaagctttgtctgtt
cttggcgaggatactgttcaatatggaggaggtcaaatgcaaggtggagataatggacat
attttctcaaatacagttttccaaactgggtctgggaaaacagcaaatgtttctgttctt
ggtgaggataatgtttttaatggacgaggagatcaaatgcaaggtggagataatggacat
agtttctcgaatacagttttccaaaccgggtctgggaaaacagtaaatgtttctgttctt
ggtgaggatactattcttaatggaggaggtcaaacacaaggtggaggtaatggacatagt
ttctcgaatacagttttccaaaccgggtctgggaaaaaagtaaatgtttcttctgcgggg
cttatgagagctaagacacttttgggtttggatggagactctagtcagttgtcaaatagt
gattcagaagcttggggaaggtcatttcagttggaagagaaaattgaggggcgtactaat
gcttttgtaacttctaagtcaatttatacgtgtgctaccgactatccaactgatacatat
ataacagaagataatccggagaaagaggtactgccaagtatcttggcatctgaaattcac
aattcctcttctaaaccatcagcaatcaaattccaaactgcaggaggaaggtctatatca
atttccgatgatgcattgcgacgtgctagaagtcttcttggcgactcagaaattgatttg
ttaacgaatgaaggaagtctagacactccagggttctcatcatttgagaaagacaaccca
tttaacaagattccgctaaacaaagaaagtgatccttctgcaccttgtttgagccaagct
catacagttaacagccacagttctaacgggattcttctcaccaaagggacctattcgaag
cataagcagtttcctgctagtttagaagctcggaatccgggggataacttggttaagcaa
attaatggaaatgggttgccatacagaggaaattgtgctaaagatagtaacattaagcct
tcaaggaatgaattcagttcaccctatatggttgctggaaattctagggcgaaagatatt
ggttcaagagtgaaaatagtgggaagaccactaagtaaaccattggttgacatatcaaac
atcgtcggcattgctcccaggaatggaccctctgaacctcatgttgcagtcagaaactct
ttgacgaaggatattggttcaacagtaaacacagtgggagcaccgcccagtgggccattt
actgatactccaaataacatcggtgctgcatgtgggaataaaaaacaagtaacttctgat
aagaggaaacttggaagtagaagttccccctctccattcaaaaggcctcgctgttctcgg
ttttccgctcctctggacaggaatatttcttttgtagtacctaatgcaacatgtgaagat
tcgccttgcaaaccaaaggtctccagtaaatatccattccaatttgcaaggaggaccatt
aaagaatactttggagggcctcctcgaaccagcaacctgttggaaaaaatagaaaacagc
gtgaaatgcatgagtgctgaccgtgctgaggcgtacatgttccttgatgcttctagcttg
gatgtaataggagcagaaggttttcatcagatgttggttcgttctggtgcttccatgctc
aatagagaatgggttgtgaatcactacaagtggataatttggaaattagcttgttatgga
agaggctatccagaaaaaggtgccatggaatatttgacagtgctgaatgtgcttgaagag
ttaaagtacaggtatgagagggaagtaaatcatgctcatagatctgcaataaaaagaatt
ctggaaggggatgcttcagctgcttcaatggtggtgttatgcatttctgctgttcgtttt
aacccaaaccaagaacttgaggcaggacatggtatggctccaggtgaagaagccaagaag
ccaagtagtgttgcaaagatagagttaactgatggatggtattcagtaaatgccactttg
gatgtagcgctgacaaatctgctcattgctggaaaactgttcgtgggccaaaaacttcgg
atctggagagcatcgttatgtggatgggttgcacccacttcacctcttgaggcatctaaa
actgttagtttacccttacacataaacgggacatacagagcacactgggctgctcggttg
gggttctgtaaggaacttggacctcccttggctttcaggtgtatcaagggtgatggtggt
ctggtgcccaggacactcgtcggagtaacacgagtttatcctgttctctataaggagagg
ttaactgatgtagactctgttgtgagatcagaaaggttggagaacaaagcccgtcaactg
tacaatgaaaggcgttccacaattgcagaaggtattgcattggagttgcaaagggaggtc
tctaattcacatggcaagaatgacagtgacagtgaagaaggggcgcaaatctttaagatc
cttgagggagctgctgagccggatgtattaatggcagacatgagcgctgagcaattaaat
tctttttctacttataaaacaaaacaagaggcaatcaggcagtcaaatatgcagaaggtt
gttgagaaagcattagaagatgctggactgaatgagagactagtcaccccatttatgaga
gtaagggtggttggtttaactagtaaagattccaaggggcaaagctgtactagagaaggc
ttgataacaatctggagcccaacagagaagcagcaacttgagctcgtggaaggacaggca
tatattgtttcagggcttaaacccctgaaattagattcaaataccctgtacattcaagca
aatggttctaccattaaatggcagccattagctcccttagcagctgcaagttttgaatca
tttttctcccctcgcaaatcaatcttcttgtcaaatatgggcgaagtttctctagccagt
gaatttgatattgctgccgtagttgtgtatgttggagagtcttacacatcttgccatcaa
aagaagcagtgggtgtttgtaacagatgattccatgtcaggatcgaaatcgcttgcagaa
ggttcttccaattgtttacttgctatcagtttctgctcacccagtatgggtaaagattca
tttgcagcgatcagttacacccttgaaggatcaactgttggcttttgtaatctggtgaag
cgagcaaaggaccaaatgaacaatctatgggtggcagaggcaacagataattcagcatat
tccctttttaatgacctccctgcttcttctcacctcaaagtagctgccacttctgcttac
agatgggcaaagatctcttcttcgactattcaaaagctcagggagagggttctatttatt
cttggagattctaaccctcctaatagctag
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