KEGG   Papaver somniferum (opium poppy): 113307716
Entry
113307716         CDS       T05758                                 
Name
(RefSeq) THO complex subunit 4B-like
  KO
K12881  THO complex subunit 4
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03013  Nucleocytoplasmic transport
psom03015  mRNA surveillance pathway
psom03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113307716
  09122 Translation
   03013 Nucleocytoplasmic transport
    113307716
   03015 mRNA surveillance pathway
    113307716
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psom03019]
    113307716
   03041 Spliceosome [BR:psom03041]
    113307716
Messenger RNA biogenesis [BR:psom03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     113307716
    TREX complex
     113307716
Spliceosome [BR:psom03041]
 Complex C
  Other components
   EJC/TREX
    113307716
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    113307716
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3
Other DBs
NCBI-GeneID: 113307716
NCBI-ProteinID: XP_026411949
LinkDB
Position
9:complement(9732280..9734815)
AA seq 256 aa
MSTSLDMSLDDLIKNNKTSEGGGRGGSSSFRGRGRARGGGGFGYGGGRTTRGGGSFGLGP
TRRFQNRGIRRAMPYAISNVVGMYDMYAAAAVDTGSNKLYISNLDYGVSNEDIKELFSEV
GEIQRYSVNYDRSGRSKGTAEVVFAQRSDAAAAVKRYNNVQLDGKPMKIEIVGASIAPPV
FPAVNTAIFANPVSFPQRGIRRGGAMGRLRGGRGSGGRISQRGGGRGRGRGRGEKVSATD
LDADLDKYHTEAMQIN
NT seq 771 nt   +upstreamnt  +downstreamnt
atgtcgacttcactagatatgtctttagatgatctaatcaagaacaacaagacatctgaa
ggtggaggaagaggcggttcttcttctttcagaggtagaggtagagccagaggtggtggt
ggttttggttacggtggtggcagaaccaccagaggcggtggtagtttcggtttaggtcct
actcgtcgttttcaaaaccgtggaatccgtcgtgctatgccttacgctatttcaaatgtg
gtagggatgtatgatatgtatgctgctgctgctgtggatactgggagtaacaagctttat
atctctaatctggattatggtgtttcaaatgaagatatcaaggaactcttctcagaggtt
ggtgaaattcagcggtattcagtcaattacgataggagcggaagatcaaagggcacggca
gaagtggtctttgctcagcgttcagatgctgcagcagctgtcaagcggtacaacaatgtt
caacttgatggaaagccaatgaagatagagattgtgggagcaagtatcgcgcctcccgta
ttccccgcagtaaacactgctatatttgcaaatccagttagctttcctcaacgtggaata
cgaaggggtggagctatgggacgactcagaggtggcaggggtagtggaggtcgcatttcc
cagagggggggaggtcgtggcaggggaagaggccgtggtgaaaaggtgtctgcaactgat
ctggatgccgatttggataagtaccacacagaagccatgcaaataaactaa

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