Papaver somniferum (opium poppy): 113308098
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Entry
113308098 CDS
T05758
Name
(RefSeq) nuclear cap-binding protein subunit 2-like
KO
K12883
nuclear cap-binding protein subunit 2
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03013
Nucleocytoplasmic transport
psom03015
mRNA surveillance pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113308098
09122 Translation
03013 Nucleocytoplasmic transport
113308098
03015 mRNA surveillance pathway
113308098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113308098
03041 Spliceosome [BR:
psom03041
]
113308098
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
113308098
Spliceosome [BR:
psom03041
]
Common components
Common spliceosomal components
Cap binding complex
113308098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
113308098
NCBI-ProteinID:
XP_026412362
LinkDB
All DBs
Position
1:171988829..171992471
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AA seq
262 aa
AA seq
DB search
MASLFKDPNLLSAYRDRRFPGSQEEFDHALQTSTTVYIGNMSFYTTEEQIYELFSRAGEI
KKIVMGLDKNSKTPCGFCFIMYYSRDDAEDAVKYISGTILDDRPIRVDFDWGFQEGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSFHPVMAPPQYGGG
GGGGGGGRHGGERGHGGHRQGRDFHRKRYREDDRRPPGNSKRFADNESRRTSDHESRPEK
NPRFRESGDSDEDDDDDSKRRH
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttgtttaaggatccaaacttactctcagcatatcgagatagaagatttcct
gggtcacaagaagaattcgatcatgcacttcaaacttcaacaactgtatatattgggaac
atgtccttttacacaacggaggagcagatttatgagttattctctcgtgctggagagatt
aagaagatagtcatgggtttggacaaaaacagcaaaaccccctgtggcttttgctttatc
atgtactactccagagatgatgctgaagatgcagtgaagtatataagtgggacaattctg
gacgatcgcccaattcgtgtggattttgattggggtttccaagaagggaggcaatggggg
agaggtcgaagtggtggtcaggttcgagatgaatatcgcacggactatgatccaggtaga
ggtggttacggaaaattggtacagaaagagctagaagcacagaggcagctagtagattac
ggtacagggtcgttgggctctttccacccagtaatggcaccacctcagtatggtggtggg
ggtggtggcggtggcggtggtagacatggtggagagcgtggacatgggggccacagacag
ggaagagattttcaccgcaagcgttaccgagaggatgatcgacgtccacctgggaactcg
aaaaggtttgctgacaatgaatcacgaagaacatccgaccatgaatctagaccggaaaag
aatccgcgattccgtgagagcggtgattccgacgaggatgatgacgatgatagtaaacga
cgacattag
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