Papaver somniferum (opium poppy): 113308760
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Entry
113308760 CDS
T05758
Name
(RefSeq) SNW/SKI-interacting protein A-like
KO
K06063
SNW domain-containing protein 1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113308760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113308760
Spliceosome [BR:
psom03041
]
Complex B
Other components
Prp19-related factors
113308760
Complex C
113308760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
113308760
NCBI-ProteinID:
XP_026413011
LinkDB
All DBs
Position
9:8658991..8660823
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AA seq
610 aa
AA seq
DB search
MSTLIDILPAVKSTTSTAHYDHANSPWFKERYLSNPEPAHAAVIAHAKAKIIPPYLNRHG
FVLRKPEDFGDGGAFPEIPVAQYPLGMGRKDGQAKLGSKILPLTVDAQGNVAFDAIVRQN
ENASKIVYASHIDLVPKVLKAGGHEPEQSDEELQKEIEETTQSTKAALEKIVNDNLSGAQ
PKNAVASQSSDTQLIQYTPSGQSAAFNSGAKKRLVKLANIQRDPLEPLKFRHKKVPRGSG
SPPVPVMHSPPRQLTVKDYQDFKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDN
FAKLAEALYVAEEKARESVAMRSKVHKEMLLKEQQRKELELRALAQKARSERKIGGAPPP
LSVSLPTPDRIMSDRGEDIQENDRESREEREERLKREKIREERKRERERERRLEAKDAAT
GKKSKIIRDRDRDVSEKVALGMANTGAATRGGEIMYDQRLFNQDKGMDSGFATDDQYNLY
DKKLFTAQNTISTLYKPRKDTDSEMYGGADEQLEEVMKTDRFKPDKAFTGVPERAGPRDR
PIEFDEPSEKDDDPFGLNRILEVQGGRKKPLDKVGSGGTMRASGGGSSRDDYNSGSGQCR
TRIRFEKGGR
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccctaatagatattcttccggctgtaaaatcaacaacatctacagctcattat
gaccatgctaactctccatggtttaaggaaagatatctcagcaatccagaaccagctcac
gctgctgtaattgcacatgcaaaagcgaaaataattcctccttatctaaaccgacatggc
ttcgtgcttcgcaaacctgaggattttggtgatggaggtgcgtttcctgagattcctgtt
gcacaatacccgcttggtatgggtaggaaagatggacaagcgaagcttgggtctaaaatc
ttaccactcacagttgatgctcagggtaatgttgcgtttgatgcaattgtcaggcagaac
gagaatgcttcaaagattgtttacgcttcacacatagacctagttcctaaggttttgaaa
gctggtggacatgaacctgaacaatctgacgaagaattgcagaaagagattgaagaaaca
acccagagcacaaaagctgctcttgaaaagattgtgaatgataatttgagtggagcacaa
ccgaagaatgccgtcgcttcacagtcgtctgatacacaattgatccagtatacaccatcc
ggacaatcggcagctttcaattcgggagcaaagaagaggctggttaagctggctaacatt
caaagggatccacttgaaccactaaagttcaggcacaagaaggttccaaggggatctggg
tccccacctgtgccggttatgcattcccctcctcggcagctaaccgtgaaagattaccaa
gacttcaaaatccctccatgtatatcaaattggaagaatccaaaaggttatacaattcca
ctggataaacgtttggctgcagatggtagaggtcttcaagaagttcagattaatgataat
tttgcaaagcttgcagaagcgttgtatgttgcagaggagaaggctagagaatcagtggca
atgagatcgaaggttcataaagaaatgttgttaaaggaacagcaaaggaaggaactagag
ttacgggccttggcgcaaaaagctcggtctgaaaggaaaattggtggtgctccccctcct
ttatctgtttctctgcctactcctgacaggatcatgagtgatcgtggtgaggatatacag
gaaaatgatagggagagtagggaagaaagagaagaacgattgaagagagaaaagattcgc
gaagagagaaagagggaaagggaaagagagagaaggttggaagctaaggatgcagcgact
gggaagaagagtaagattattagggatagagatagagatgttagtgaaaaggttgcatta
ggtatggctaacactggagctgctactcgtggcggagaaattatgtacgatcaaagactt
ttcaaccaagataaaggaatggactctggattcgcaactgacgatcaatacaacttgtat
gataaaaagttgtttacagcacaaaatactatatctactctgtataagccgaggaaagat
actgatagtgaaatgtatggaggtgcagatgagcagcttgaggaggttatgaaaacagat
agatttaagcccgataaagcatttacgggtgttcctgaaagggcaggtcccagggatagg
ccaattgagtttgacgaaccatctgaaaaagatgatgatccgttcgggttgaataggatt
ctcgaggtacaggggggacgtaaaaagcctttggataaagttgggagtggtggaacaatg
agggcaagtggtggtggatcttccagagatgattataatagtggatctggtcaatgccga
actcgcattaggtttgaaaaaggtggacgttag
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