Papaver somniferum (opium poppy): 113308990
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Entry
113308990 CDS
T05758
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113308990
04121 Ubiquitin system [BR:
psom04121
]
113308990
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113308990
Membrane trafficking [BR:
psom04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
113308990
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113308990
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
Fer2_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
113308990
NCBI-ProteinID:
XP_026413209
LinkDB
All DBs
Position
9:complement(175507272..175509583)
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AA seq
373 aa
AA seq
DB search
MDEAMVSRYWCHMCSQIVNPVIEVEMKCPFCQSGFVEEMYTATGENHETETETETDIGLG
SDRALSLWAPILLSMMGAGGDGTRHRLSRRESGGGDEEEENEEPQRGESEQDGELESILR
RRRRNSAAIIQLLHSLTSGIMSEIENSGNESERERERDHNQERVILINPFNQAIILQGSI
GQSQSQNQNQSIPGTLGDYLVGPGLELLLQHLAENDPNRYGTPPAKKEAVEAMPTVTIGE
NLQCSVCLEDFEIGSGAKEMPCKHKFHEGCILPWLELHSSCPVCRCQIPGAEDGPKVDVE
DASGNRTDSNAAGGERGEGDENGRSWLPIPWPFSGLFSLSGTPNVGNSLSSATESAPSAS
GANNNNNNSADEN
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagctatggtttctagatattggtgccatatgtgttcacaaattgtaaatcca
gtgatagaagtggaaatgaaatgcccattttgtcaaagtgggtttgtggaagaaatgtat
actgctaccggtgagaatcatgaaactgaaactgaaactgaaactgatataggattagga
tcagatagagccttgtctctttgggctcccattttgcttagcatgatgggcgccggaggt
gatggtactcgtcacagattatctagaagagaatcaggaggaggagatgaagaagaagaa
aatgaagaaccacaaagaggagaatccgaacaagatggggagcttgaatcaattctaagg
aggaggagaagaaattcggctgcaattattcagttgcttcatagccttacatcagggatc
atgtctgaaatagagaattctggaaatgaaagtgaaagggaaagagaaagagaccataat
caggaacgtgttatcttgattaacccgttcaatcaagctataattcttcaagggtcaatt
ggccaatctcagagccagaatcagaaccaaagcatccctggaactttgggggattaccta
gttggtcctggtttagagttacttctccagcatttagcagaaaatgacccaaataggtat
ggaaccccaccagctaagaaggaagcagtggaagcaatgcccactgtcacaattggggag
aatttacaatgttcagtatgtttagaggattttgagataggttctggagccaaggagatg
ccttgtaagcataagtttcatgaagggtgtattttgccatggttagagcttcacagttct
tgtccagtttgcaggtgccagatacctggtgctgaggatggacctaaagttgatgtagaa
gacgcgtctgggaatagaacagatagtaatgctgcaggaggagagagaggtgaaggagat
gaaaatgggaggtcttggcttccgattccgtggccttttagtggcttgttttctttatca
ggaaccccgaatgttggaaattccctttcttctgcaacagaatcagctccatcagcatct
ggagctaataataataataacaacagcgctgatgagaattga
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integrated database retrieval system
