Papaver somniferum (opium poppy): 113309150
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Entry
113309150 CDS
T05758
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 36-like isoform X1
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psom03009
]
113309150
Enzymes [BR:
psom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113309150
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
90S particles
Helicases
113309150
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
113309150
NCBI-ProteinID:
XP_026413353
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All DBs
Position
1:complement(180808583..180814764)
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AA seq
463 aa
AA seq
DB search
MEEDTIVDQPPLFSKKKFTPKVSEKPPPVIENPQPNEPLEVEKSCDPESYTLSFSDLGLA
DWATRTCKELGMKKPTQVQHHCIPRILAGQDVLGLAQTGSGKTAAFALPIFNRLAENPYG
VFALVITPTRELGYQLAEQFRALGASLHLRCAVVVGGMDMITQAQALMQHPHVVIATPGR
IKVLLEQNPDIPSVFSKTKFLVLDEADRVLDVGFEEELSAIFQYLPKDRQTLLFSATMTE
NLQTLLEVSANKAYFYEQYEGFKTVESLKQQYVFVPKNVKDVYLLHILSKMEDMGVRSAI
IFVSTCRSCHLLSLLLEELEQPAVGLHSHKSQALRLSALHRFKSGQTPILLATDVASRGL
DIPTVDLVINYDIPRYARDYVHRVGRTARAGRGGLAVSFVTQIDVDLIHEIEAVVGKQLD
KFECKENDVLAEITKATPLLYGISVYSKISLVASLFYYILRFH
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagatactatagttgatcaacctccgttgttctcgaagaagaagtttactcca
aaagtttccgaaaaaccacccccagttatagaaaatcctcaacctaatgaacccctagaa
gtggaaaaatcatgcgaccctgaatcgtatactcttagtttctctgatcttggtttagct
gactgggctactcgaacatgcaaggagcttggaatgaagaaacccacgcaagttcaacat
cactgtattcctcgaattcttgctgggcaagatgttttaggtttagctcagactggtagt
gggaagacagcggcttttgcattacctatttttaaccgccttgcagaaaacccctatggt
gtgtttgctttggtgataacacctactagggagctgggataccaattggcagagcagttc
agggcacttggagcatccttgcacctacgctgtgctgttgttgttggaggaatggatatg
atcactcaagcacaagctttgatgcaacacccacatgttgtgatcgcaacaccagggagg
attaaagtcctccttgaacagaatccagatattccatccgtcttctcgaagaccaagttt
ctagttttggatgaggctgatagagttttggatgttggttttgaggaggaactgagtgca
atatttcagtacttgcccaaagatagacaaactttgttgttttctgcaacaatgacggaa
aacttacaaacactgcttgaggtttctgcaaacaaggcatacttttacgagcagtatgag
ggatttaagactgttgaatctctcaaacaacagtatgtgtttgttccgaaaaacgtgaaa
gatgtttatctgctgcacattttgtcaaaaatggaggacatgggcgttcgctcagccata
atatttgtttctacatgcaggagttgtcaccttcttagtttgttactggaagaacttgaa
caaccagcagtgggattacattcacacaagtcccaggctctaagactttctgcactacat
cgattcaaatctggtcagactcccattctgctggcaacagacgtggctagtcggggttta
gacattccaacagttgatcttgtcataaattatgatattccgagatatgctagagactat
gttcatcgtgttgggcgtacagctagagcaggcagaggggggctggctgtgagctttgtc
acacagatcgatgtagatctcattcatgaaatagaggctgtcgttgggaagcagttggat
aagtttgagtgcaaagaaaacgatgttcttgctgaaattactaaggcaacacctctattg
tacggaataagtgtatattctaagatttcactagttgcgtcgctcttttattatattcta
agatttcactaa
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