Papaver somniferum (opium poppy): 113309254
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Entry
113309254 CDS
T05758
Name
(RefSeq) uncharacterized protein LOC113309254
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113309254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113309254
03019 Messenger RNA biogenesis [BR:
psom03019
]
113309254
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113309254
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113309254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
113309254
NCBI-ProteinID:
XP_026413455
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All DBs
Position
9:complement(177793994..177797849)
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AA seq
516 aa
AA seq
DB search
MFPFQPPFPHLPNQIQMGGSNFSTPQQVMPSNQGVTNQSNFSNGFNPGVVAPYGIFSAMP
NAHFLNVANPHPQMQNSHVGRPFPGSGPHNMNSVMTSPQCGNSQNFPQNTSQQGPLFMQN
HNRPPFQSYPQAVMFNPYNQPMPMNQPTGYPRSQFVQIPVNPSQGLPHPCPNPLWGNQQM
GFMNSSGVASQNAQGLHSFNPIPAAQNTSQKNSQGNKTNDGGKDASNISQKSFHNKKFTR
NHQESGRGELPNPRFQKSKFQARENAKGNFKSNKGKGGKGPQNAGPGKSLLDNSVKHASE
EHKRFPRPNYSEREIQQWREERKKNHPLRSNAEKKLADKRSEEAKRRRQQLKEILAKQVE
LGCDVAELPPNYLTDSEKEGRFQNKHNKRGRRGKQNRFSKKQKAGNGEDSVVQPDMCREP
TLLQKLLSADIKRDRSHLLQVFRFMVTNSFFKDWPDTPLEFPLITIKEGESKGEISEEIS
SPILDHSNSILQGDEEDEDNDETKEESDTEEGELTE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgtttccttttcaacccccctttccccatcttcccaaccaaatacaaatgggaggaagt
aacttctcaactccacaacaggtcatgccatccaatcaaggtgtcacaaaccaatcaaat
ttttctaatggcttcaatcctggagttgtggctccgtatggaatcttttctgccatgcct
aatgcccactttctgaatgttgctaaccctcatccacaaatgcagaatagccatgttggg
agaccctttcctggttctggtcctcataatatgaattctgtcatgacatctccacaatgt
gggaattctcaaaactttccgcagaatactagtcagcaagggccattgtttatgcaaaat
cacaatagaccaccctttcagtcatatccacaggcagtaatgtttaatccatacaatcag
cctatgcccatgaaccaacctactggttatccacggagtcagtttgtacaaatccctgtc
aatccttctcaaggtctgcctcatccatgtccaaatcccttgtgggggaaccaacaaatg
ggtttcatgaattccagtggagttgcatcgcagaatgcacaaggtctgcattcgtttaac
ccaatcccagcagctcagaatacatctcaaaaaaattcacaggggaacaaaactaatgac
ggtggaaaagatgcctcaaacatcagccagaaaagctttcacaacaaaaaatttacaagg
aatcaccaggaatctggtagaggagaattaccaaatccaagatttcaaaaatccaagttt
caagccagggaaaatgccaagggaaatttcaagtccaacaagggaaagggaggaaaaggt
ccacaaaatgctggtcctggaaaatctctactggataattctgtcaagcatgctagcgag
gaacataaaagatttccccgtccaaactactcagaacgagaaatccagcaatggcgtgaa
gaaagaaagaagaaccatcctctgaggtccaatgcggagaagaagttggctgataaacgc
tctgaagaggcgaaaaggcggcgtcagcaacttaaggagatccttgcgaagcaggtcgag
ttaggttgtgatgttgctgaattaccgccaaattatttaacagactctgaaaaggaagga
aggtttcaaaacaagcacaacaaaagaggaagacgtggcaagcaaaaccgattctccaaa
aagcagaaggcggggaacggagaagattcagttgtacagcctgatatgtgcagggagcca
acccttcttcagaaacttctaagtgcagacattaagagagataggagccatcttctgcaa
gttttcaggtttatggtgacaaattctttcttcaaagactggccagacacgccattagag
tttcctttgatcaccattaaagaaggagagagtaaaggtgagatcagtgaagagatatct
tctccaattctggatcatagtaattctatattacaaggtgatgaagaagatgaggataat
gacgagacaaaggaggaatccgacactgaagagggcgaactcacagagtag
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