KEGG   Papaver somniferum (opium poppy): 113309539
Entry
113309539         CDS       T05758                                 
Name
(RefSeq) protein RRP6-like 2 isoform X1
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    113309539
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psom03019]
    113309539
Messenger RNA biogenesis [BR:psom03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     113309539
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC PMC2NT Bep_C_terminal
Other DBs
NCBI-GeneID: 113309539
NCBI-ProteinID: XP_026413754
LinkDB
Position
9:complement(98141649..98149653)
AA seq 903 aa
MESDSEKINKQKAEALQAFINGPLSSSISKLSASIKAIPHNEDFHFFNNFEEFKKPVKDM
SEKSKSMLIAIGDLNYPLDKPIPFPDGLDECNDWLTDVTDDIYERFDVSIDEFKSIRNKE
EEMGRKIVTSDDGFQLVCRRNKKGGGGFVGNEEESSKKLSSPSLSVKVASKDKKTTGAKP
KVPFHIPTVKRPQDEYNIIVNNINQPFEHVWLSRSEDGCRFIHPLENLSVLDFVDKNIGD
TEPEKPLPLESTPFTLIEDVKQLKELSKKLRDVNEFAVDLEHNQYRSFQGMTCLIQISTR
TEDFIVDTLKLRVHVGPYLREVFKDPSKKKIMHGADRDILWLQRDFGIYVCNLFDTGQAS
RVLELERNSLEFLLNHFCGVAANKEYQNAEWRLRPLPDEMVRYAREDTHYLLHIFDIMKG
MLLSASTSSENGEDLLLEVYNRSCAICMQLYEKELLTDTSYLYIYGLQDADLNSQQLAIV
AGLCEWRDAVARMEDESTGFILPNKALIEIARQKPDSASKLRRLVKSKHPYIEHNLGTVV
AIIKNALQNAPAFEIAAEQLKEQVKERALTASKQHTEVVPDEFEASPTSEDRTEMEESPP
AHPEMINTDVSNSVNSSVLRDKQVAAELNNGNNTLHGVSVEQSSRGIGDGKKEENTGTGS
CLFPTKAVPEVTVQVLKKPNRAFGALFGNSGSKRKLDPNSKDKAQMKVEQIKSSVTLPFH
SFMGNDQSKPLVEVRTKSSDFSLPDEQIPPGDEVAKVDDIIPLESDQGINGDGAESESDK
DEQPMSLSELSSNFKKCFQPKQELRRNKVEKSQESEEVSLNFEPFNYEAAREHQKFGKDQ
EEKQEAEEGDEQGPKSPKESKGRRKKPVFTRLPTEEEAKAFQQQARRRQAFPQSGNRSST
FRS
NT seq 2712 nt   +upstreamnt  +downstreamnt
atggaaagtgattcagagaaaatcaataagcaaaaggcagaagctttacaagcttttatt
aatggtccgttatcatcttctatatctaagctatctgcttctataaaagctattcctcat
aatgaagattttcatttttttaataactttgaggaatttaaaaaaccagtcaaagatatg
tctgagaaatctaaatctatgttgattgctattggtgatttgaattatccattagataaa
cctattccgtttcctgatggtttagatgaatgtaatgattggttaactgatgtaacagat
gatatttacgaaagatttgatgtttcaattgatgagtttaagagtataagaaataaggaa
gaggaaatgggtaggaagattgttacttctgatgatgggtttcagttggtttgtaggaga
aacaagaaaggaggaggagggtttgttggtaatgaagaagagagtagtaagaagttgagt
tctccttcattgtctgtgaaggtggcatcaaaagataagaagacaactggggcaaaaccg
aaggttccttttcatatacctacagtgaagcggccacaagatgagtataatatcattgtt
aacaatataaaccagccatttgagcatgtttggttgagtaggagtgaagatggctgcagg
tttattcatcccctggaaaatctttctgtgctggattttgttgataaaaacatcggtgac
actgaacccgaaaaacctctgccactagaaagcactccatttactctgatagaggatgtt
aaacagctgaaagaactgtctaagaagctgcgtgatgtgaatgaatttgcggttgatttg
gagcataaccagtataggtccttccaaggaatgacttgcttgattcagatttctactaga
acagaggattttatagtagatacattaaagctccgtgtacatgttggtccatacctaagg
gaagtgttcaaagacccctctaagaaaaagatcatgcatggggctgatcgggatatactg
tggcttcaacgagattttggcatatatgtttgcaacttattcgacactggacaggcatca
agggtgttggagttagagcggaacagtttggagtttcttctaaatcacttttgtggtgta
gctgcgaacaaagaataccagaatgcagaatggagactcaggcctcttcctgatgagatg
gttagatatgccagagaggatacacattatctgttgcatattttcgacattatgaaaggc
atgttgctttcagcatctaccagctctgaaaatggtgaagatcttctgttagaggtctac
aaccgaagttgtgccatatgcatgcaactttacgaaaaggagctgttgaccgacacatcg
tatctctacatctatggtttacaagatgctgatttgaactctcagcagcttgctattgtt
gctgggctttgtgaatggagagatgctgttgcccgtatggaggatgaaagcactggcttt
atattgccaaacaaagcactaatagaaattgccaggcagaagcctgacagtgctagtaag
ttgcgccgactagtgaagtcaaagcatccatatattgagcacaatcttggaactgtagtt
gccattataaaaaatgccttacaaaatgctccagctttcgaaatcgctgctgaacaactg
aaggaacaagtgaaggaacgtgcattaacggcatccaagcaacatacagaagtagttcct
gacgaatttgaagcctcgcctacttcagaggatcgtacagagatggaggagtccccccct
gctcatccagaaatgattaacactgacgttagcaacagtgtgaacagtagcgttttacgt
gacaagcaagtggctgcagaactcaacaatggtaataatactttgcatggagtgtccgtg
gaacagagttctcgtggaattggagatggaaagaaagaagagaatactggaacaggctct
tgcttatttcccacaaaggctgttccagaggtgaccgttcaagtgttaaagaagccaaat
cgtgcttttggggcattgtttggtaactcgggttcaaagagaaaacttgatccaaattct
aaggataaggctcagatgaaggttgaacagatcaaatcatcggtaactcttccttttcac
tcattcatgggcaatgaccagtcaaaacctcttgtagaagtgagaactaaatcctctgat
ttctccctgcctgatgaacaaattcctccaggggatgaggttgcaaaagtagatgatata
attccattggagagtgatcagggaataaatggcgatggtgccgagtctgaatcggataaa
gatgaacaacccatgtctctctctgaattatcctccaactttaagaaatgttttcagccg
aaacaagaactaagaagaaacaaggttgagaaatctcaagagtctgaggaagtaagtttg
aattttgagcctttcaattatgaagcagctagggaacatcaaaaattcgggaaagatcaa
gaagaaaagcaggaagcagaggagggcgatgaacaaggacctaaaagtccgaaagagtcc
aaggggaggcgcaagaaaccagttttcacccgactacctacagaagaagaggccaaggca
tttcagcagcaggccagaaggcgtcaagcttttccacagagtgggaaccgaagttcaacc
tttcgttcttag

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