Papaver somniferum (opium poppy): 113309653
Help
Entry
113309653 CDS
T05758
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113309653
04121 Ubiquitin system [BR:
psom04121
]
113309653
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113309653
Membrane trafficking [BR:
psom04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
113309653
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113309653
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING-like
zf-RING_16
Rad50_zn_hook
FAR1_N
zf-C3H2C3
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
113309653
NCBI-ProteinID:
XP_026413907
LinkDB
All DBs
Position
9:complement(162372106..162374213)
Genome browser
AA seq
420 aa
AA seq
DB search
MASNGSSSYWCYRCSRFVRVWIREVDRNIVCPDCDGGFVEEVENPPRSTHTESQRRRRFP
SAAMYMLGNRSNNNNTNNSEENSNNNNTNSGSGFRRSRRNGGDRSPFNPVIVLRGPSEGG
VTAAAVPEGAVGGGVNGERGSFELYYDDGAGSGLRPLPASMSDFLMGSGFDRLLDQLAQI
EINGVGRCDHPPASKAAVESMPTIEIIDSHVSTESHCAVCKEAFELGSEAREMPCKHIYH
TDCILPWLSLRNSCPVCRHELPTDVRGRSSPESDASQVQQQQEQSPVAATITEEDTVGLT
IWRLPGGGFAVGRFSGGRRAGEREFPVVYTEMDGGFNTAGAPRRISWTSRGSRSRESGGI
GRVFRNIFSFFRRSSSSSSSNSSSESGTTRRSRSNSVFNRNSRRHSRAWALVDSSTIARW
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaatggatcttcttcatattggtgttatagatgtagtagatttgtaagggta
tggattagagaagttgatagaaatattgtttgtcctgattgtgatggtggatttgtagaa
gaagttgaaaatccacctcgatctacacatactgaatctcaaagaagaagaagatttcct
tctgctgctatgtatatgttaggtaatcgatctaacaataataacactaataattcagaa
gagaacagcaataataataatacaaattctgggtctgggtttcgtcgtagtcgaagaaac
gggggagatcgttctccgtttaatcctgtaattgttcttagaggaccttctgaagggggt
gttactgcggctgctgttccagaaggtgctgttggtggtggtgttaatggggaaagagga
agttttgaactttattatgatgatggtgctggttcaggtctgcgaccattacctgcaagt
atgtctgatttcttgatgggatccgggtttgatcggcttcttgatcaattagcgcagatt
gaaatcaacggtgtaggtcgatgtgatcatccaccagcatcaaaagcagctgttgaatct
atgccaactattgaaatcattgatagtcatgtttccactgaatcacactgtgcagtttgt
aaagaggctttcgaacttggatcagaagctcgagaaatgccttgtaagcatatttatcat
acagattgtatacttccatggctgtctttaagaaattcttgtcctgtttgccgacatgag
ttacctactgatgttcgtggaaggagttcgcctgaatctgatgcaagtcaagttcaacaa
caacaggagcaatcccctgtagcagcaacaattactgaagaagatactgttgggcttaca
atctggaggcttcctggtggtgggtttgctgttggtaggttttcgggtggtagacgtgct
ggggagcgtgaatttccagttgtttacactgaaatggatggtggtttcaatacagctggt
gctcctaggagaatatcatggacatcaagaggtagtaggtctagagaaagtggtggaatt
ggaagagtttttcgaaatatcttctcattctttaggaggagttcgtcttcttcatcatct
aattctagttcagaatcaggaactacacgtagaagtcgttccaattcagtgttcaataga
aattcaagaaggcatagcagagcttgggctttggtcgatagtagtacaattgcaagatgg
tga
DBGET
integrated database retrieval system
