Papaver somniferum (opium poppy): 113309700
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Entry
113309700 CDS
T05758
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113309700
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
113309700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
113309700
NCBI-ProteinID:
XP_026413976
LinkDB
All DBs
Position
9:complement(5323762..5328455)
Genome browser
AA seq
693 aa
AA seq
DB search
MASFRSYPPQPPPPSNQNPVAPPLPGGGSSQSRGFSSQPPLPPAPTSFPPNYQPNSNHHY
RPAPPQPQQAYPYQPPQVPPQPYPAAAAPPPMPPSGSQYYPASQYSQFRNSVQPPTVPPP
PGPPPPSSPPPPPPPSVPPPSLPPPPPPSSSSQPHHQSRDNRSNNHGHHGHHRGGPRESS
GSGLHDQSRHHSKHGLPPKQHKSSGPPPPASRPGGRVETEEERMIRKKREYEKQRQEEKH
RHQAKESQSSAMQKAQIMASGAKGHGSIVGSRMGAGKSTPFLNAERIENRLKKPTTFLCK
LKFRNELPDPTAQPKLMLLNTNKDLYTKYTITSLEKMHKPKLFVEPDLGIPLDLLDISVY
NPPDTKQTLAPEDKELLRDAESATPIKQDGIKRKERPTDKGLSWLVKTEYISPISMEAAK
TPLSEKQAKDLREIRGGRHILDNTNNREKQIQAINASFEACKSRPVHATNKRLQPVEILP
LLPDFDRSNDKFVMATFDGEPTADSEVFSKLDKTTRDVHESQAIMKSFTASGSDPAMLDK
FLAYMAPSPDELWKDVYEESEDISYSWVREYQWDVRGNDAEDHATYIVALGEETARYLPL
PTKLVLRKKRAKDGRSNTEIEHYPVPASVTVRNRPEVSAKELVKDSGDYTNSKGNYSSSK
RGRSGNEDNMRHYKSPRVQEMDNYSGGEDEMSD
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatttaggtcatacccaccacaacctccgccaccatcaaatcaaaacccagta
gcgccacctcttccaggtggtggaagtagtcagagtagaggtttttcaagtcaaccgcca
cttccgccagctcctacatcattcccccccaactatcaaccaaattcaaaccaccattat
agaccagccccaccacaaccgcagcaggcgtatccgtatcagccaccgcaagttccacca
cagccttatccggcagcagcagcaccaccacctatgcccccatctggttcgcagtattat
ccggcatcgcagtattcacagtttcgtaattcagtacagccacctacagtgcctcctcca
ccaggaccacctccaccttcatcgcctccgcctccacctcctccatctgttcctccacct
tcgcttcctccacctccaccgccttcatcgagctcccaaccacatcaccagtctagagat
aaccggagtaataatcatgggcaccatgggcatcatagaggaggacctagggagtctagt
gggtcaggtttgcatgatcagtcaaggcatcattcgaaacatgggttacctcctaaacaa
cacaagtcatcaggtcctccaccgcccgcatcgcgtcctggtggaagggtagagacggag
gaagagaggatgataaggaagaagagagagtatgagaaacaaaggcaagaagaaaagcat
aggcatcaagcaaaggaatctcaaagctctgcgatgcagaaggcacagataatggcttct
ggggcaaagggacatggatcaattgttgggtcacgaatgggagcggggaaaagtactcca
tttttgaatgcagagaggattgagaatcggttaaaaaagcctaccacattcttgtgcaag
ttgaagtttaggaatgaacttccagatccgacagcacaaccgaagttaatgttattaaac
actaataaagatctatacactaagtacaccattacatcattggagaaaatgcacaagcct
aaattatttgtcgagcctgatcttgggataccacttgacctactcgacatcagtgtatac
aatcctcccgacacaaaacaaactctggctcccgaggataaagagttgttgcgggatgct
gagtcagcaactcctatcaaacaagacggcataaaaaggaaagagaggcctactgataaa
ggtctgtcgtggttggtcaagacagaatatatttctcctattagcatggaagcagcaaaa
acgccccttagtgaaaaacaagccaaagatctacgagaaatcaggggaggtcgccatatt
ttggataataccaataacagggaaaaacaaatccaagcaattaatgcgtccttcgaggca
tgcaagtcgcggccagttcatgccactaataaaaggttacagcctgttgagattctgccg
ttgctcccggactttgataggagtaatgataaatttgttatggctacatttgatggcgaa
ccaaccgctgattcagaagtgttcagcaagttggacaaaactacgcgtgacgtgcatgaa
tcacaggcaattatgaagagttttacagcatctggctcagatcctgctatgctggataaa
tttttggcatatatggctccttcaccagatgagctttggaaggatgtctatgaagaaagt
gaggacatttcatactcctgggtcagggagtatcagtgggatgttcgaggtaatgatgca
gaggaccatgcaacatacattgttgctctcggtgaagaaaccgcacgttacttgccactt
ccgacaaagcttgttctaaggaaaaagagggctaaagatggtaggtccaatacagagatt
gagcattatccagtacctgcgagtgtgacagtaagaaacagaccagaagtttctgcgaag
gagttggtgaaggattcaggagattatacaaattcaaaggggaattattcaagttccaaa
cgagggaggtccggaaacgaggataacatgcggcattataagtcccctcgagtccaagag
atggataactatagtgggggtgaagacgagatgtccgattga
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