Papaver somniferum (opium poppy): 113309757
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Entry
113309757 CDS
T05758
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113309757
03041 Spliceosome [BR:
psom03041
]
113309757
03036 Chromosome and associated proteins [BR:
psom03036
]
113309757
Enzymes [BR:
psom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113309757
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113309757
mRNA cycle factors
Common to processing body (P body) and stress granule
113309757
Spliceosome [BR:
psom03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113309757
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
113309757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
113309757
NCBI-ProteinID:
XP_026414058
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All DBs
Position
9:87344773..87351623
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AA seq
639 aa
AA seq
DB search
MRSSWADSVANSASENSAAGSSLNNNNINSRSSYVPPHLRNRPPPSENPSPAVSGFPGNS
SGIDRSGYSGVAPPPAGGSRWGAPRQADLGQTGYGGGGGGRIGGGGGGGGGWNNRSGGWD
RGRDREVNPFGPDEEIDVPEETTENTGINFDAYEDIPVETSGENVPPPVNTFADIDLGEA
LNLNIKRCKYVKPTPVQRHTIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMTGQAAQR
PRGARTVYPLALILSPTRELSCQIHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVD
ILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPRGARQT
MLFSATFPREIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEFVLDSDKRSHLMDLLHAQ
KANGAQGKQALTLVFVETKKGADSLEHWLCMNGFPATTIHGDRTQQEREYALRSFKSGTT
PILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSSM
ARSLADLMQESNQEVPAWLSRYAARSTFGGGKNRRSGAGRFGGRDFRRESSYGRGGGADY
HGGGNSGGGYGAPSSGYGGGSGYGGGGGYSGGGASSAWD
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcttcctgggccgattctgttgcgaactctgcatctgagaattcagctgctggt
tcttctctcaataacaacaacattaattctcgatcttcttacgttccaccacatcttcgt
aatagacctcctccttcagaaaatccttctcctgcagtatcaggttttcctggtaattca
tctggtattgatagatctggttacagtggtgttgctcctcctccggctggaggttcccga
tggggtgctcctaggcaggctgatttagggcaaactggttatggtggtggtggtggtggc
cgcattggtggtggtggtggtggtggtggtggttggaataacagaagtggtggttgggat
cgaggaagagatcgagaggttaacccttttggaccagatgaagaaattgatgttccagag
gaaactacggaaaatactggtattaattttgatgcttacgaagatattcccgtggaaacc
agtggtgaaaatgttccaccacctgttaatacttttgcagatatagatttaggtgaagcc
ctaaatcttaatattaagagatgcaaatatgttaaacctacacctgttcaacgacatact
attcctatttctcttgctggtagagatttgatggcttgtgcacaaactgggtctgggaaa
acagctgctttttgttttccaattatcagtggtatcatgactggacaggctgcacagaga
ccacgaggtgctcggacggtttatccattagcacttattctctcccctactcgggagctg
tcatgccagatacacgaggaagcacgtaaattctcttatcaaactggtgttagggttgtt
gttgcttatggaggcgcaccaatcaatcaacagctgagagagctggagagaggtgttgat
attcttgtggctaccccagggagattggtagacttgctggaaagggctagggtgtcattg
cagatgatcaggtatttggctctagatgaggctgacagaatgttggacatgggttttgag
ccacaaattagaaagatcgttgaacaaatggacatgcctccacgaggtgcaaggcagacc
atgctctttagtgccacctttccaagagagatacagagattggcctctgacttcctctcg
aattacattttcctcgctgttggaagggttggttcaagtactgatttgatcgtccaaaga
gttgaatttgttctagattcagacaagaggagccatctaatggatcttcttcatgcacag
aaggcaaatggagctcagggaaagcaagctctgactttagttttcgtggagacaaagaaa
ggagccgattcattggaacattggctgtgtatgaatgggttccctgctactactattcat
ggggatagaacccaacaggaaagggaatatgcactgaggtctttcaaaagtgggacgact
cctatattggttgcaacagacgttgcagcacgtggtcttgatatccctcatgttgcacat
gttgtcaattttgatcttcccaacgatattgacgactatgtgcaccgaatagggcgtact
ggaagagcaggtaagtcagggctggcaactgcatttttcaacgagaacaactcatctatg
gcaaggtcactggcagatctgatgcaagaatctaaccaagaagttcctgcttggctctcc
cgttatgccgctcgctctacttttggtgggggaaagaaccgccggtcaggtgcaggtcgt
tttggtggtcgtgacttccgaagggaatcctcctatggtagaggtggtggtgcagattat
cacggtggaggcaacagtggtggtggatatggtgcaccttctagtggatatggaggtggt
agtggatatggaggtggtggcggatatagtggtggaggtgccagcagtgcctgggattag
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