Papaver somniferum (opium poppy): 113309784
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Entry
113309784 CDS
T05758
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00040
Pentose and glucuronate interconversions
psom01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113309784
Enzymes [BR:
psom01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
113309784
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
113309784
NCBI-ProteinID:
XP_026414081
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Position
9:complement(56415051..56418345)
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AA seq
503 aa
AA seq
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MLFITSNYILCTSLLLTLFTHTLGSTRFNLSLPHQHPYPESVVQELQRKVNVSVHRRQML
GVYDKGQSSSSSSSSSSSCLTGNPIDDCWRCDTNWQANRQRLADCGLGFGKDSLGGKGGQ
IYIVTDSSDSDLINPKPGTLRYGVIQTEPLWIIFSGPMQIKLKDELIINSFKTLDGRGAN
VHIVGAGCITLQYVSNIIIHNIHIHHCYPSSPGNVRSSPDHYGRRTKSDGDGISIFGARK
IWIDHCSLSYCKDGLIDAIMGSTGITISNNYFSHHNEVMLLGHQDDYMPDSGMQVTIAFN
HFGEDLVQRMPRCRRGYIHVVNNDFTQWEMYAIGGSANPTINSQGNRYIAPANPNAKEVT
KRVDTGEWADWDWRSEGDIMVNGAFFIPSGGGAGRSYAKASSVEPKSSALIEQLTMNAGV
LGGNRENGDSGPSDGGGGYYGGGGGGGNNGASGFFGMIFGAGIGAAPSSSPPLMTVLMII
MSSFLLIILSTTRRLGFWLLVQL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcatcactagcaactacattctctgtacttcacttctccttactctatttacc
cacactctaggttctacccgcttcaatctttcacttcctcatcaacatccttaccctgaa
tcagttgttcaagaacttcaaaggaaagttaatgtgtcagttcataggaggcaaatgttg
ggggtttatgacaagggtcagtcatcatcatcatcctcgtcctcgtcttcatcatgtttg
acaggtaacccaattgatgattgttggagatgtgatacaaactggcaagcaaataggcag
agattagcagattgtggtctagggtttggtaaagattcattaggtggaaaaggaggtcag
atctatatagttacagattcatcagatagtgatcttattaaccctaaaccaggtacacta
agatatggagttatccagacagaaccactctggattatcttctcaggtcctatgcaaatt
aaacttaaagatgagcttataatcaacagtttcaaaacactggatggccgcggtgcaaat
gtacacattgttggtgctggttgtattacattgcagtatgttagtaatattatcattcat
aacattcatattcaccattgttatccttcatcccctggtaatgtacgttccagtccggat
cattacggtcgaagaactaaatctgatggggatggtatatctatatttggagctaggaaa
atttggattgatcattgttcattgtcttactgcaaagatggtttgattgatgctataatg
ggctcgactgggattacaatttcgaacaactatttctcacatcataatgaagttatgtta
ctaggtcatcaagatgattatatgcctgattcaggaatgcaagtaactatagcttttaat
catttcggtgaagatttagttcaacgaatgcctcgatgtagacgtggttacattcatgtt
gttaataatgattttacgcaatgggaaatgtatgccattggcggtagcgccaatccgaca
atcaatagtcaggggaatcgttacattgctcctgctaatcctaatgcaaaagaggtgact
aagagggtggatacaggggaatgggcagactgggattggagatcggaaggagatataatg
gtgaatggggcattctttataccatcaggaggtggagctggccgcagttatgcaaaagca
tcaagtgttgaacctaaatcatctgctctcatagaacaattaaccatgaatgcaggcgta
cttggtggcaacagagagaatggggatagtggacctagtgatggtgggggcggatattat
ggtggcggcggtggcggtgggaacaatggagcaagtggattcttcgggatgatctttgga
gctggaattggcgcagctccctcttcatctcctccgctaatgacggttttaatgataata
atgtcttctttccttttgataattttgtctaccactaggcgacttggtttttggttacta
gtacaactatag
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