Papaver somniferum (opium poppy): 113309797
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Entry
113309797 CDS
T05758
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c isoform X1
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
psom04141
Protein processing in endoplasmic reticulum
psom04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113309797
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113309797
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113309797
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psom01009
]
113309797
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113309797
03009 Ribosome biogenesis [BR:
psom03009
]
113309797
03110 Chaperones and folding catalysts [BR:
psom03110
]
113309797
04131 Membrane trafficking [BR:
psom04131
]
113309797
03051 Proteasome [BR:
psom03051
]
113309797
03029 Mitochondrial biogenesis [BR:
psom03029
]
113309797
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psom04147
]
113309797
Protein phosphatases and associated proteins [BR:
psom01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
113309797
Spliceosome [BR:
psom03041
]
Complex B
Other components
Prp19 complex
113309797
Complex C
Prp19-CDC5 complex
113309797
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
113309797
Chaperones and folding catalysts [BR:
psom03110
]
Heat shock proteins
HSP70 / DNAK
113309797
Membrane trafficking [BR:
psom04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
113309797
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
113309797
Proteasome [BR:
psom03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
113309797
Mitochondrial biogenesis [BR:
psom03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
113309797
Exosome [BR:
psom04147
]
Exosomal proteins
Proteins found in most exosomes
113309797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
DACNG
Motif
Other DBs
NCBI-GeneID:
113309797
NCBI-ProteinID:
XP_026414094
LinkDB
All DBs
Position
9:complement(9213180..9216344)
Genome browser
AA seq
591 aa
AA seq
DB search
MNPVNTVFDAKRLIGRKISDPSVQADMKLWPYKVTAGAGEKPMISVTYKGEEKHFSAEEI
SSMVLVKMREIAEAFLGSSVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAA
AIAYGLDKKSSSTREKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRM
VNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEVDSLYEGVDFYTSL
TRARFEEMNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQEFFNGK
ELCKSINPDEAVAYGAAVQAAILTGAGEGNENLSSLLLLDVAPLSLGLETAGGVMTTLIP
RNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTRDNNLLGKFELSGIPPAPRGVPQIT
VCFDIDANGILNVSAEDKTTGKKNKITITNDKGRLSKEEIEKMVQEAERYKTEDEEHKKK
IESKNGLENYAYNMRNTIKDEKIAGKLDPADKKKIEDAIEAAIQWLDSNQLAEADEFDDK
MKELESLCNPIIAKMYQGGGAGADMGAFGGMDEDGPSMGGAGAGPKIEEVD
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctgtcaacaccgtctttgatgccaagcgtttgatcggacgaaagatttctgat
ccatcagttcaagctgacatgaagttgtggccttacaaggttacagctggagcaggtgaa
aagcccatgatttctgtaacttacaaaggcgaagagaagcacttttctgctgaagagata
tcatctatggttcttgtcaagatgcgcgagattgcagaagcttttcttgggtcttctgtg
aagaatgctgttgttactgtccctgcatacttcaatgattcacagcgtcaagccacgaag
gatgctggtgttattgctggtctcaatgtgctacgaattatcaatgaaccaacagccgct
gcaattgcttatggtcttgataagaaatcgtcgagcaccagggagaagaatgtcctaatt
ttcgatcttggtggtggtacatttgatgtttctttactgactattgaagagggtattttt
gaagtgaaggcaacagctggagatactcatcttggaggagaggattttgataacaggatg
gtgaatcactttgtgcaagagtttaagaggaagaacaagaaggatattagtggaaatcct
agggctctaagaaggttgaggacagcttgtgagagagcaaagaggactctttcgtccact
gcacagactacaattgaagtcgattctctctatgagggtgttgatttctacacttccctt
actcgtgctagattcgaagagatgaacatggatctattcaggaagtgtatggagccagtt
gagaagtgcttgagggatgctaagatggacaagagcagcgttcatgatgtcgttctggtt
ggtggatcaactagaattcccaaagtgcagcaattgttgcaggagttctttaatgggaaa
gaactctgcaagagcattaatcctgatgaagccgtggcttatggagcagctgtgcaggct
gccatcttgactggtgctggtgagggtaatgagaacttgtcttcattgttgctgttggat
gttgctcctctctcccttgggctcgagactgctggaggggttatgactactttgatccca
agaaacaccactattcccaccaagaaggagcaagttttctctacctactcagacaaccag
cctggagtcttaattcaggtgtttgaaggcgagagggcaaggaccagggataacaacttg
cttggaaagttcgagttgtctggaattccccctgcgccccgtggtgttcctcagatcaca
gtttgctttgacattgatgcaaatggtattctgaatgtatctgctgaggataagactaca
gggaagaagaacaaaattacaatcacaaatgataaaggaaggttgtccaaggaggaaatt
gagaagatggtgcaagaggctgagaggtacaagacagaggatgaagaacacaagaagaaa
attgaatcgaaaaatggtttggagaattatgcttacaatatgaggaacaccatcaaggac
gagaagattgctgggaagttggatccagctgacaagaagaagattgaggatgccattgaa
gctgctatccagtggctcgactccaaccagcttgcagaggctgatgaatttgatgataag
atgaaagagttggagagtctgtgcaacccaatcattgctaagatgtatcaaggtggtggt
gctggagctgacatgggtgcctttggtggcatggatgaggatggcccttcaatgggtggt
gctggtgcaggacctaagattgaggaagttgattaa
DBGET
integrated database retrieval system
