Papaver somniferum (opium poppy): 113309896
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Entry
113309896 CDS
T05758
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113309896
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113309896
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Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
Seryl_tRNA_N
Allexi_40kDa
Motif
Other DBs
NCBI-GeneID:
113309896
NCBI-ProteinID:
XP_026414200
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Position
9:complement(171435815..171446325)
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AA seq
548 aa
AA seq
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MTTGFSGQILAEKLSKLNNSQQSIESLSSWCISHRKKAKQVVETWDKLFKSQKEKRVTFL
YLANDILQNGKRKGSEYVNEFWRVLPAAVKEVLENGDENGRKAATRLVGIWDERKVFGSR
GQGLKDEMLGKDSPPLLENNVRSPSLNSIKVLKKDAHSIRIKLAVGGTPEKIFTAFQSIY
DEHLDEDTVLSKCKAAVNRVEKMGKEVGYACTQGNQPKSTLGEVQEQEDFLKKCVEQLKN
VETTRESFLTQLREVLKDQESKLDLVRTHLQVAQVQIDQVSNVKQKLSSAPISSASPPTT
TTLSSETIAVETNPSPIQTTNSLSLPPPVTQPMTAFTNPITPEEENRKAAAAVAAKLAAS
ASSAQMLSAVLSSLAAEEAASMTNGVTSSGSTSLSIFPPEKRAKLDNSTPVSDMGNTTFF
TNVHQQAMPNHVTGNSQIQPPFPPPPPPPVPPQSLHPFTQTTNSMAGTVPYRFGSIKGLP
PPPPMPTHVLMGSARPPSTPPPQQQQQQQQQQQQQQQQPATAGYYQPHGMVFYGQSHHQP
TTPPVPRQ
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgacaactggttttagcgggcagatattagctgagaagctttctaagctcaacaattca
cagcaaagcattgaatcattatcaagttggtgtatttctcatcggaaaaaagcgaagcaa
gttgttgaaacatgggataagctgtttaaaagtcaaaaagaaaaacgtgttacattttta
tacttggcaaatgatattttgcaaaatggtaaacgtaaaggaagtgagtatgtgaatgaa
ttttggcgagtcctacctgcagctgttaaggaggtacttgagaatggtgatgaaaatgga
aggaaagcagccaccaggcttgtaggcatatgggacgaaaggaaggtctttggttctcgt
ggtcagggtcttaaagatgaaatgctgggtaaagattcacctcctttattagagaacaat
gtaaggagtccgagtttgaattccatcaaagtattgaagaaggatgctcactcaataaga
ataaaattagctgttggaggtacacctgagaagatttttactgcatttcaatcaatatat
gacgagcatcttgatgaagacactgttttaagcaaatgcaaggctgctgttaaccgtgtc
gagaaaatggggaaagaagttggttatgcttgcactcaaggaaatcagccgaaatcaact
ttgggggaagtacaggagcaggaagactttcttaagaaatgtgttgagcaactaaaaaat
gttgaaacaaccagagaatcctttctaactcagctcagagaagtacttaaagatcaggaa
tcaaagctggatcttgttcgcactcacttgcaggttgctcaagtccaaattgatcaagtg
agcaatgtaaagcagaagcttagttcagctccaatttccagtgctagcccaccaaccaca
acaactctatcctcggagacaattgcggtagaaaccaatccatctcccatccaaacaacc
aacagcttgtctctgccacctcctgtaacccaacctatgacagcatttacaaatccaata
actcccgaggaagaaaacaggaaagcagcagcagccgttgctgccaaattagcagcctca
gcatcctccgctcaaatgcttagtgcagttctctcatctcttgctgcagaagaagccgct
tccatgactaatggcgtcacatctagtgggtcaacgagtttatctattttccctcctgag
aaaagagccaagcttgataattccacgccagtttctgacatgggcaacaccaccttcttc
acaaatgtgcaccagcaagcaatgccaaatcacgtcactggtaactcccagatacagcct
ccatttccacctccaccacctcctcccgtgccacctcaatcccttcatccgttcacacaa
accactaattcgatggcagggacagtgccttacaggtttggctccattaagggtttaccc
cctccaccacctatgcctacacatgttttaatgggttcagcaaggcctccaagtactcca
ccaccacagcagcagcagcaacagcagcagcaacagcagcaacagcagcagcagccagca
acagcagggtactaccagccacatgggatggttttttatggacaaagtcatcatcagcca
actacgccgccagttcctcggcagtga
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